C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntaxin binding protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116266 STXBP3 9606 + 1:108746674-108809526 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370008 STXBP3-001 108746688-108809526 protein_coding
  ENST00000469338 STXBP3-002 108746682-108753201 retained_intron
  ENST00000472099 STXBP3-005 108796235-108807481 processed_transcript
  ENST00000483586 STXBP3-006 108746674-108757005 retained_intron
  ENST00000485167 STXBP3-003 108760053-108781542 processed_transcript
  ENST00000486601 STXBP3-007 108759057-108776423 processed_transcript
  ENST00000495245 STXBP3-004 108781861-108793631 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370008ENST00000483586ENST00000485167ENST00000486601
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370008 7.267±0.00 8.605±0.00 1.981±0.00 12.427±3.94 6.724±1.15 7.744±1.88 4.559±1.67 9.170±5.45 6.558±2.06 8.050±0.18 5.038±0.00 6.620±2.34 6.391±0.44 9.260±2.44
ENST00000483586 N/A N/A 3.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485167 N/A N/A N/A N/A N/A 2.493±0.00 N/A N/A N/A N/A N/A 1.850±0.00 N/A N/A
ENST00000486601 N/A N/A N/A N/A N/A N/A N/A 8.480±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000732 CIL_000732_0002 CGP 1:108712657-108809526

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006887 IEA exocytosis
GO:0006904 IEA vesicle docking involved in exocytosis
GO:0007420 IEA brain development
GO:0007596 TAS blood coagulation
GO:0015031 IEA protein transport
GO:0015758 IEA glucose transport
GO:0016192 IEA vesicle-mediated transport
GO:0016323 IEA basolateral plasma membrane
GO:0016324 IEA apical plasma membrane
GO:0017075 IEA syntaxin-1 binding
GO:0019905 IPI syntaxin binding
GO:0022615 IEA protein to membrane docking
GO:0030073 IEA insulin secretion
GO:0030168 TAS platelet activation
GO:0031091 IDA platelet alpha granule
GO:0032868 IEA response to insulin
GO:0042581 IDA specific granule
GO:0043312 IEP neutrophil degranulation
GO:0045955 IMP negative regulation of calcium ion-dependent exocytosis
GO:0051291 IEA protein heterooligomerization
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome
GO:0070527 IMP platelet aggregation
GO:0070820 IDA tertiary granule

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008142 stxbp3 syntaxin binding protein 3 protein_coding Danio_rerio
ENSMUSG00000027882 Stxbp3a syntaxin binding protein 3A protein_coding Mus_musculus

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