C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntaxin binding protein 3A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027882 Stxbp3a 10090 - 3:108793176-108840526 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102621 Stxbp3a-001 108793176-108840511 protein_coding
  ENSMUST00000106596 Stxbp3a-003 108825618-108840510 protein_coding
  ENSMUST00000124782 Stxbp3a-005 108794428-108802534 retained_intron
  ENSMUST00000124903 Stxbp3a-006 108794872-108797784 retained_intron
  ENSMUST00000138552 Stxbp3a-002 108824533-108840526 retained_intron
  ENSMUST00000150010 Stxbp3a-004 108800112-108805731 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102621ENSMUST00000106596ENSMUST00000124782ENSMUST00000138552ENSMUST00000150010
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102621 5.589±1.54 1.379±0.32 13.875±1.26 2.122±0.50 4.464±1.44 2.326±0.70 2.938±0.81 6.255±1.25 6.278±2.60 5.958±1.97 10.211±0.76 5.584±6.33 12.375±5.81 1.661±0.59
ENSMUST00000106596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.394±0.00
ENSMUST00000124782 N/A 1.288±0.00 N/A 1.364±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138552 N/A 1.535±0.48 N/A N/A 2.076±0.00 N/A N/A N/A N/A N/A N/A 2.279±0.31 N/A N/A
ENSMUST00000150010 N/A 1.331±0.09 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.215±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006887 IMP exocytosis
GO:0006904 IEA vesicle docking involved in exocytosis
GO:0007420 IMP brain development
GO:0015031 IEA protein transport
GO:0015758 IDA glucose transport
GO:0016323 IEA basolateral plasma membrane
GO:0016324 IDA apical plasma membrane
GO:0017075 IEA syntaxin-1 binding
GO:0019905 IDA syntaxin binding
GO:0022615 IMP protein to membrane docking
GO:0030073 IMP insulin secretion
GO:0031091 IEA platelet alpha granule
GO:0032868 IMP response to insulin
GO:0042581 IEA specific granule
GO:0043312 IEA neutrophil degranulation
GO:0045955 IEA negative regulation of calcium ion-dependent exocytosis
GO:0051291 IEA protein heterooligomerization
GO:0070062 IEA extracellular vesicular exosome
GO:0070527 IEA platelet aggregation
GO:0070820 IEA tertiary granule

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008142 stxbp3 syntaxin binding protein 3 protein_coding Danio_rerio
ENSG00000116266 STXBP3 syntaxin binding protein 3 protein_coding Homo_sapiens

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