C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lectin, galactoside-binding, soluble, 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116977 LGALS8 9606 + 1:236518000-236552981 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000238181 LGALS8-011 236523873-236544815 protein_coding
  ENST00000323938 LGALS8-024 236524024-236549002 protein_coding
  ENST00000341872 LGALS8-003 236523439-236549263 protein_coding
  ENST00000352231 LGALS8-014 236518265-236548283 protein_coding
  ENST00000366583 LGALS8-009 236523989-236543609 retained_intron
  ENST00000366584 LGALS8-002 236523599-236551010 protein_coding
  ENST00000406509 LGALS8-006 236518269-236542990 protein_coding
  ENST00000416919 LGALS8-201 236523439-236552974 protein_coding
  ENST00000430527 LGALS8-023 236518260-236541672 protein_coding
  ENST00000434231 LGALS8-028 236524020-236541706 nonsense_mediated_decay
  ENST00000442397 LGALS8-015 236524006-236542827 nonsense_mediated_decay
  ENST00000450372 LGALS8-202 236523439-236552981 protein_coding
  ENST00000454943 LGALS8-013 236518214-236541691 protein_coding
  ENST00000475670 LGALS8-005 236523969-236526435 retained_intron
  ENST00000481485 LGALS8-012 236518000-236539063 protein_coding
  ENST00000489586 LGALS8-010 236543027-236548295 retained_intron
  ENST00000525042 LGALS8-026 236526071-236548161 protein_coding
  ENST00000525789 LGALS8-021 236543296-236545201 retained_intron
  ENST00000526589 LGALS8-001 236518273-236552981 protein_coding
  ENST00000526634 LGALS8-007 236524581-236548796 protein_coding
  ENST00000526652 LGALS8-017 236541273-236542856 retained_intron
  ENST00000527974 LGALS8-008 236518239-236548281 protein_coding
  ENST00000528259 LGALS8-020 236540247-236548280 retained_intron
  ENST00000528782 LGALS8-016 236523985-236542807 retained_intron
  ENST00000529489 LGALS8-027 236518301-236537580 protein_coding
  ENST00000529796 LGALS8-019 236542331-236543013 retained_intron
  ENST00000532640 LGALS8-018 236542715-236544848 retained_intron
  ENST00000532826 LGALS8-022 236523985-236539222 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000323938ENST00000341872ENST00000416919ENST00000450372ENST00000525042ENST00000526634
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000323938 7.768±0.00 N/A N/A 5.588±0.00 7.455±0.00 N/A 7.748±2.40 N/A 4.284±0.00 6.570±0.00 1.687±0.00 N/A N/A 13.284±0.00
ENST00000341872 N/A N/A N/A N/A N/A N/A N/A N/A 4.900±0.00 5.823±0.00 N/A N/A 5.928±0.45 N/A
ENST00000416919 N/A N/A 1.363±0.00 N/A N/A 1.990±0.00 N/A N/A 1.782±0.00 N/A N/A N/A N/A N/A
ENST00000450372 2.798±0.00 4.908±0.00 N/A 1.941±0.00 3.451±0.00 2.188±0.70 2.443±1.12 4.363±0.00 1.688±0.00 2.854±0.11 N/A 3.159±1.04 3.476±0.26 3.777±0.00
ENST00000525042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.377±0.00
ENST00000526634 N/A N/A N/A N/A N/A N/A N/A 7.129±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097Y CIL_00097Y_0001 VISTA 1:236338883-236940914

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002317 IEA plasma cell differentiation
GO:0005515 IPI protein binding
GO:0005615 TAS extracellular space
GO:0005737 IEA cytoplasm
GO:0016020 IDA membrane
GO:0030246 IEA carbohydrate binding
GO:0031295 IEA T cell costimulation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037066 LGALS8 (1 of 2) lectin, galactoside-binding, soluble, 8 protein_coding Danio_rerio
ENSDARG00000037613 LGALS8 (2 of 2) lectin, galactoside-binding, soluble, 8 protein_coding Danio_rerio
ENSMUSG00000057554 Lgals8 lectin, galactose binding, soluble 8 protein_coding Mus_musculus

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