C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lectin, galactose binding, soluble 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057554 Lgals8 10090 - 13:12439415-12464944 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000099820 Lgals8-004 12439424-12461503 protein_coding
  ENSMUST00000099821 Lgals8-201 12439417-12461738 protein_coding
  ENSMUST00000124888 Lgals8-001 12439415-12464944 protein_coding
  ENSMUST00000133143 Lgals8-006 12439417-12448736 retained_intron
  ENSMUST00000135060 Lgals8-009 12452738-12455014 retained_intron
  ENSMUST00000135166 Lgals8-002 12439418-12461506 protein_coding
  ENSMUST00000143693 Lgals8-003 12439418-12461493 protein_coding
  ENSMUST00000144283 Lgals8-005 12440845-12461495 protein_coding
  ENSMUST00000152478 Lgals8-007 12459271-12461047 processed_transcript
  ENSMUST00000155871 Lgals8-008 12451417-12456523 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099820ENSMUST00000099821ENSMUST00000124888ENSMUST00000133143ENSMUST00000135060ENSMUST00000135166ENSMUST00000143693ENSMUST00000144283ENSMUST00000155871
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099820 6.794±0.92 20.504±2.23 7.912±1.61 2.732±0.76 8.659±0.61 8.104±1.83 4.972±1.20 10.295±1.67 16.202±12.72 12.272±1.54 5.487±0.70 7.729±2.61 3.580±0.82 N/A
ENSMUST00000099821 N/A N/A N/A 1.044±0.00 N/A N/A N/A N/A 2.200±0.32 N/A 1.156±0.18 N/A 2.536±0.02 N/A
ENSMUST00000124888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.853±3.96
ENSMUST00000133143 5.072±0.87 N/A 8.289±2.15 3.689±0.00 6.687±3.26 4.292±1.21 2.508±0.06 N/A 2.655±1.31 4.881±0.38 1.642±0.00 6.097±1.49 3.440±0.51 N/A
ENSMUST00000135060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 98.409±0.00
ENSMUST00000135166 N/A N/A 5.525±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.414±1.84 N/A
ENSMUST00000143693 N/A N/A 5.420±0.00 1.434±0.00 N/A N/A N/A N/A 1.695±0.35 N/A N/A N/A 2.743±0.54 N/A
ENSMUST00000144283 N/A N/A N/A N/A N/A N/A N/A N/A 3.339±0.34 N/A N/A 9.134±0.00 6.010±1.60 24.516±0.00
ENSMUST00000155871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 49.720±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097Y CIL_00097Y_0002 VISTA 13:12065828-12670427

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002317 IDA plasma cell differentiation
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0016020 IEA membrane
GO:0030246 IDA carbohydrate binding
GO:0031295 IDA T cell costimulation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037066 LGALS8 (1 of 2) lectin, galactoside-binding, soluble, 8 protein_coding Danio_rerio
ENSDARG00000037613 LGALS8 (2 of 2) lectin, galactoside-binding, soluble, 8 protein_coding Danio_rerio
ENSG00000116977 LGALS8 lectin, galactoside-binding, soluble, 8 protein_coding Homo_sapiens

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