C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal-induced proliferation-associated 1 like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116991 SIPA1L2 9606 - 1:232397965-232561558 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262861 SIPA1L2-201 232397968-232515566 protein_coding
  ENST00000308942 SIPA1L2-002 232398710-232462417 protein_coding
  ENST00000366630 SIPA1L2-001 232397965-232561558 protein_coding
  ENST00000486472 SIPA1L2-003 232490686-232493660 processed_transcript
  ENST00000494056 SIPA1L2-005 232399142-232402766 processed_transcript
  ENST00000495863 SIPA1L2-004 232403533-232415870 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262861ENST00000308942ENST00000366630
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262861 7.717±0.00 2.138±0.00 5.387±0.00 1.842±0.00 8.652±0.00 13.941±9.28 1.739±0.00 1.185±0.46 3.204±1.12 2.018±0.00 3.487±1.37 2.397±0.71 3.443±0.75
ENST00000308942 N/A N/A N/A N/A N/A N/A N/A 0.851±0.00 N/A 1.723±0.00 2.898±0.00 4.760±1.37 4.061±0.00
ENST00000366630 N/A N/A 0.998±0.00 N/A N/A 6.235±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006B0 CIL_0006B0_0001 CGP 1:231626815-232561558
CIL_00086G CIL_00086G_0001 VISTA 1:232318184-232921690
CIL_0006AV CIL_0006AV_0001 CGP 1:232397965-232808407

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061640 SIPA1L2 (1 of 2) signal-induced proliferation-associated 1 like 2 protein_coding Danio_rerio
ENSDARG00000088396 SIPA1L2 (2 of 2) signal-induced proliferation-associated 1 like 2 protein_coding Danio_rerio
ENSMUSG00000001995 Sipa1l2 signal-induced proliferation-associated 1 like 2 protein_coding Mus_musculus

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