C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00086G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1714 VISTA 9606 1:232318184-232921690
GeneTranscriptPositionBiotype
ENSG00000116991 (SIPA1L2)
signal-induced proliferation-associated 1 like 2 		ENST00000262861 (SIPA1L2-201) 232397968-232515566 protein_coding
ENST00000308942 (SIPA1L2-002) 232398710-232462417 protein_coding
ENST00000366630 (SIPA1L2-001) 232397965-232561558 protein_coding
ENST00000486472 (SIPA1L2-003) 232490686-232493660 processed_transcript
ENST00000494056 (SIPA1L2-005) 232399142-232402766 processed_transcript
ENST00000495863 (SIPA1L2-004) 232403533-232415870 processed_transcript
ENSG00000212916 (MAP10)
microtubule-associated protein 10 		ENST00000418460 (MAP10-001) 232804892-232808407 protein_coding
ENSG00000225919 (RP11-66A2.1)
 ENST00000430921 (RP11-66A2.1-001) 232718071-232722250 lincRNA
ENSG00000232175 (RP4-659I19.1)
 ENST00000435206 (RP4-659I19.1-001) 232917235-232918018 processed_pseudogene
ENSG00000236497 (RP11-66A2.2)
 ENST00000457698 (RP11-66A2.2-001) 232727254-232742715 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00086G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1714 VISTA 10090 8:125257735-125859984
GeneTranscriptPositionBiotype
ENSMUSG00000001995 (Sipa1l2)
signal-induced proliferation-associated 1 like 2 		ENSMUST00000108775 (Sipa1l2-201) 125418063-125492710 protein_coding
ENSMUSG00000031851 (Ntpcr)
nucleoside-triphosphatase, cancer-related 		ENSMUST00000034313 (Ntpcr-001) 125734203-125748235 protein_coding
ENSMUST00000065135 (Ntpcr-002) 125734238-125739179 protein_coding
ENSMUST00000123554 (Ntpcr-006) 125734233-125736329 retained_intron
ENSMUST00000138656 (Ntpcr-004) 125733090-125748034 processed_transcript
ENSMUST00000143504 (Ntpcr-008) 125730028-125747809 protein_coding
ENSMUST00000146055 (Ntpcr-003) 125729963-125745299 processed_transcript
ENSMUST00000151172 (Ntpcr-005) 125730032-125738136 processed_transcript
ENSMUST00000152189 (Ntpcr-007) 125735835-125747997 protein_coding
ENSMUSG00000043051 (Disc1)
disrupted in schizophrenia 1 		ENSMUST00000074562 (Disc1-201) 125054195-125261151 protein_coding
ENSMUST00000075730 (Disc1-202) 125054195-125261151 protein_coding
ENSMUST00000098311 (Disc1-203) 125054195-125261151 protein_coding
ENSMUST00000115885 (Disc1-204) 125054195-125261151 protein_coding
ENSMUST00000117658 (Disc1-002) 125054195-125261858 protein_coding
ENSMUST00000118942 (Disc1-001) 125054195-125261858 protein_coding
ENSMUST00000121953 (Disc1-003) 125054230-125261148 protein_coding
ENSMUST00000122389 (Disc1-004) 125054209-125090995 protein_coding
ENSMUST00000126111 (Disc1-005) 125087987-125102878 processed_transcript
ENSMUSG00000050930 (Map10)
microtubule-associated protein 10 		ENSMUST00000053078 (Map10-001) 125669818-125673359 protein_coding
ENSMUSG00000060212 (Pcnxl2)
pecanex-like 2 (Drosophila) 		ENSMUST00000047239 (Pcnxl2-002) 125751508-125898317 protein_coding
ENSMUST00000119305 (Pcnxl2-004) 125751511-125774128 retained_intron
ENSMUST00000120589 (Pcnxl2-003) 125751509-125839850 retained_intron
ENSMUST00000131127 (Pcnxl2-001) 125837607-125898317 protein_coding
ENSMUST00000187772 (Pcnxl2-007) 125861191-125898275 processed_transcript
ENSMUST00000189197 (Pcnxl2-006) 125827163-125829033 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00086G_0001ENSG00000116991ENST00000262861ENST00000308942ENST00000366630ENST00000486472ENST00000494056ENST00000495863ENSG00000212916ENST00000418460ENSG00000225919ENST00000430921ENSG00000232175ENST00000435206ENSG00000236497ENST00000457698CIL_00086G_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00086G_0001ENSG00000116991ENST00000262861ENST00000308942ENST00000366630ENSG00000212916ENST00000418460ENSG00000225919ENST00000430921ENSG00000232175ENST00000435206ENSG00000236497ENST00000457698CIL_00086G_0002ENSMUSG00000001995ENSMUST00000108775ENSMUSG00000031851ENSMUST00000034313ENSMUST00000065135ENSMUST00000123554ENSMUST00000138656ENSMUST00000143504ENSMUST00000146055ENSMUST00000152189ENSMUSG00000043051ENSMUST00000074562ENSMUST00000075730ENSMUST00000098311ENSMUST00000115885ENSMUST00000117658ENSMUST00000118942ENSMUST00000122389ENSMUST00000126111ENSMUSG00000050930ENSMUST00000053078ENSMUSG00000060212ENSMUST00000047239ENSMUST00000119305ENSMUST00000120589ENSMUST00000131127ENSMUST00000189197
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116991 ENST00000262861 7.717±0.00 2.138±0.00 N/A 5.387±0.00 1.842±0.00 8.652±0.00 13.941±9.28 1.739±0.00 1.185±0.46 3.204±1.12 2.018±0.00 3.487±1.37 2.397±0.71 3.443±0.75
ENST00000308942 N/A N/A N/A N/A N/A N/A N/A N/A 0.851±0.00 N/A 1.723±0.00 2.898±0.00 4.760±1.37 4.061±0.00
ENST00000366630 N/A N/A N/A 0.998±0.00 N/A N/A 6.235±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000486472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212916 ENST00000418460 0.180±0.00 0.612±0.00 0.025±0.00 0.819±0.02 0.365±0.10 0.218±0.08 0.379±0.15 0.706±0.22 0.355±0.15 0.307±0.21 0.463±0.35 0.617±0.19 0.211±0.08 1.312±0.20
ENSG00000225919 ENST00000430921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 0.294±0.14
ENSG00000232175 ENST00000435206 N/A 0.037±0.00 N/A N/A N/A 0.216±0.00 N/A N/A N/A N/A N/A 0.041±0.00 0.060±0.01 0.077±0.00
ENSG00000236497 ENST00000457698 0.037±0.00 0.052±0.00 N/A 0.020±0.00 0.052±0.00 0.018±0.00 0.006±0.00 0.101±0.05 0.017±0.00 0.012±0.00 0.046±0.00 0.012±0.00 N/A 2.143±0.72
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001995 ENSMUST00000108775 N/A 13.609±0.00 2.355±0.00 7.831±2.30 1.424±0.81 1.078±0.60 2.155±0.17 N/A 0.577±0.00 N/A 0.905±0.03 5.408±2.43 9.257±7.80 6.512±0.00
ENSMUSG00000031851 ENSMUST00000034313 4.856±0.56 5.774±2.15 13.549±1.65 7.574±2.31 2.656±0.64 3.376±1.27 3.070±0.44 3.653±0.52 3.782±1.77 1.842±0.68 5.763±0.38 4.924±2.99 2.732±0.96 21.557±4.05
ENSMUST00000065135 2.024±0.12 N/A 2.576±0.05 0.835±0.11 1.722±0.00 N/A 1.000±0.22 1.732±0.16 1.307±0.42 1.057±0.04 0.762±0.05 1.449±0.60 0.781±0.49 N/A
ENSMUST00000123554 N/A 10.412±1.33 N/A N/A 5.012±0.00 8.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138656 N/A N/A N/A N/A 2.526±0.62 3.887±0.93 N/A N/A 1.250±0.00 1.774±0.56 N/A 4.741±0.99 N/A N/A
ENSMUST00000143504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.343±0.00 N/A N/A
ENSMUST00000146055 N/A N/A N/A N/A 5.679±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152189 8.175±2.17 11.335±3.54 5.143±0.00 3.346±1.06 6.721±0.81 10.627±2.23 2.686±0.62 5.905±1.24 3.005±0.83 4.814±1.93 N/A 18.401±4.51 1.832±0.26 24.110±7.30
ENSMUSG00000043051 ENSMUST00000074562 0.317±0.00 N/A N/A N/A N/A 0.110±0.00 N/A N/A 0.060±0.00 N/A N/A 0.401±0.00 0.082±0.00 N/A
ENSMUST00000075730 N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A 0.013±0.00 N/A 0.052±0.00 N/A 0.055±0.00 N/A
ENSMUST00000098311 0.318±0.00 N/A N/A N/A 0.330±0.05 0.110±0.00 0.227±0.00 0.202±0.05 0.041±0.02 N/A N/A 0.276±0.12 0.092±0.01 N/A
ENSMUST00000115885 N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A 0.013±0.00 N/A 0.050±0.00 N/A 0.055±0.00 N/A
ENSMUST00000117658 N/A N/A N/A N/A N/A 0.191±0.00 0.237±0.00 0.174±0.00 0.088±0.01 N/A 0.052±0.00 N/A 0.133±0.00 N/A
ENSMUST00000118942 0.327±0.05 N/A N/A 0.478±0.03 0.221±0.00 0.090±0.00 0.283±0.07 N/A 0.091±0.04 0.769±0.00 0.164±0.02 0.363±0.17 0.208±0.00 0.087±0.00
ENSMUST00000121953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000122389 N/A N/A N/A 0.107±0.00 N/A 0.168±0.06 N/A 0.200±0.00 0.036±0.02 N/A 0.078±0.01 0.181±0.00 0.056±0.02 0.022±0.00
ENSMUST00000126111 N/A N/A N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A 0.743±0.28 0.235±0.04 N/A
ENSMUSG00000050930 ENSMUST00000053078 1.010±0.50 3.010±0.51 1.376±0.10 1.496±0.57 1.036±0.48 1.328±0.15 0.823±0.12 1.323±0.35 0.189±0.12 1.643±0.41 0.690±0.05 2.875±1.37 0.931±0.33 7.445±2.56
ENSMUSG00000060212 ENSMUST00000047239 N/A 0.044±0.00 N/A 5.370±3.05 N/A 0.081±0.03 0.018±0.00 0.024±0.01 0.021±0.01 N/A N/A N/A N/A N/A
ENSMUST00000119305 0.285±0.16 0.107±0.01 0.333±0.15 13.391±0.00 0.100±0.02 0.130±0.06 0.104±0.07 0.071±0.03 0.034±0.02 0.378±0.00 0.177±0.08 1.667±0.36 0.212±0.24 2.531±0.94
ENSMUST00000120589 0.540±0.61 0.153±0.03 0.400±0.29 1.334±0.43 N/A 0.082±0.03 0.145±0.04 0.051±0.05 0.023±0.01 0.120±0.00 0.124±0.02 2.783±1.45 0.123±0.07 0.083±0.00
ENSMUST00000131127 N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A 0.009±0.00 N/A N/A N/A 0.010±0.00 N/A
ENSMUST00000187772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189197 N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A

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