C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: latrophilin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117114 LPHN2 9606 + 1:81306160-81992436 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319517 LPHN2-004 81800397-81992196 protein_coding
  ENST00000359929 LPHN2-001 81699770-81991426 protein_coding
  ENST00000370713 LPHN2-003 81800397-81992196 protein_coding
  ENST00000370715 LPHN2-002 81800397-81992196 protein_coding
  ENST00000370717 LPHN2-201 81800397-81992422 protein_coding
  ENST00000370721 LPHN2-005 81306166-81991368 protein_coding
  ENST00000370723 LPHN2-011 81306166-81991368 protein_coding
  ENST00000370725 LPHN2-010 81306166-81991368 protein_coding
  ENST00000370727 LPHN2-009 81306166-81991368 protein_coding
  ENST00000370728 LPHN2-007 81306166-81992422 protein_coding
  ENST00000370730 LPHN2-008 81306166-81992422 protein_coding
  ENST00000402328 LPHN2-006 81979889-81992423 protein_coding
  ENST00000449420 LPHN2-012 81942969-81991368 protein_coding
  ENST00000464551 LPHN2-020 81988392-81990709 processed_transcript
  ENST00000464775 LPHN2-017 81979922-81990681 processed_transcript
  ENST00000468283 LPHN2-016 81955767-81966435 processed_transcript
  ENST00000469377 LPHN2-021 81306199-81992436 processed_transcript
  ENST00000472424 LPHN2-019 81981853-81990840 processed_transcript
  ENST00000473719 LPHN2-013 81306160-81735330 processed_transcript
  ENST00000492666 LPHN2-015 81306192-81414384 processed_transcript
  ENST00000498776 LPHN2-018 81984317-81985410 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319517ENST00000359929ENST00000370713ENST00000370715ENST00000370717ENST00000370725ENST00000370730ENST00000402328ENST00000449420
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319517 3.734±0.00 4.428±0.00 N/A N/A 4.608±0.00 3.633±3.15 4.907±0.00 5.572±0.95 N/A 36.743±0.00 N/A 2.507±1.07 7.917±3.59 1.646±1.15
ENST00000359929 N/A N/A 3.536±0.00 2.139±0.00 1.932±0.00 2.045±0.00 2.522±0.00 3.602±0.00 4.865±0.00 9.997±0.00 0.565±0.08 2.783±0.37 N/A N/A
ENST00000370713 2.319±0.00 2.761±0.00 N/A N/A N/A N/A N/A N/A N/A 7.377±0.00 0.658±0.00 N/A N/A 1.085±0.00
ENST00000370715 N/A N/A N/A 0.962±0.00 1.623±0.00 N/A N/A N/A 2.810±0.00 N/A N/A N/A N/A 0.248±0.00
ENST00000370717 2.542±0.00 N/A N/A 0.963±0.00 N/A 0.902±0.00 N/A N/A 1.571±0.00 N/A 0.286±0.00 2.441±0.97 N/A N/A
ENST00000370725 N/A N/A N/A 2.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370730 N/A N/A N/A N/A N/A N/A N/A 2.619±0.00 N/A N/A N/A N/A N/A N/A
ENST00000402328 N/A 5.556±0.00 N/A 1.854±0.00 N/A N/A N/A 2.710±0.00 6.960±0.00 N/A N/A 0.837±0.00 N/A 0.535±0.00
ENST00000449420 N/A N/A N/A 1.701±0.00 1.671±0.00 1.922±0.00 N/A N/A N/A N/A N/A 0.496±0.00 1.724±0.00 0.859±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00003A CIL_00003A_0002 CGP 1:78889764-81992436
CIL_0007JZ CIL_0007JZ_0001 UCNEbase 1:81231098-81907429
CIL_00003B CIL_00003B_0002 CGP 1:81306160-83999150

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 NAS:IEA G-protein coupled receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0016020 IEA membrane
GO:0016021 NAS:IEA integral component of membrane
GO:0016524 NAS latrotoxin receptor activity
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069356 lphn2a latrophilin 2a protein_coding Danio_rerio
ENSDARG00000087965 LPHN2 (2 of 2) latrophilin 2 protein_coding Danio_rerio
ENSMUSG00000028184 Lphn2 latrophilin 2 protein_coding Mus_musculus

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