C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: immunoglobin superfamily, member 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117154 IGSF21 9606 + 1:18107746-18378483 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000251296 IGSF21-001 18107746-18378482 protein_coding
  ENST00000412684 IGSF21-002 18278845-18376367 protein_coding
  ENST00000473951 IGSF21-004 18375957-18376920 processed_transcript
  ENST00000497331 IGSF21-003 18361367-18378483 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000251296ENST00000412684ENST00000473951ENST00000497331
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000251296 1.470±0.00 N/A 0.304±0.00 7.344±4.84 0.634±0.00 0.438±0.40 3.498±0.00 0.786±0.00 1.495±0.00 0.448±0.14 1.178±0.81 0.312±0.03
ENST00000412684 N/A N/A N/A 4.748±0.00 0.879±0.00 N/A N/A N/A 0.193±0.00 0.371±0.00 0.900±0.00 N/A
ENST00000473951 N/A N/A N/A N/A N/A N/A N/A N/A 0.380±0.00 N/A N/A N/A
ENST00000497331 N/A 0.253±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A2 CIL_0009A2_0001 VISTA 1:17846589-18449531
CIL_00098Z CIL_00098Z_0001 VISTA 1:18089892-18691429

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031049 igsf21a immunoglobin superfamily, member 21a protein_coding Danio_rerio
ENSDARG00000056084 igsf21b immunoglobin superfamily, member 21b protein_coding Danio_rerio
ENSMUSG00000040972 Igsf21 immunoglobulin superfamily, member 21 protein_coding Mus_musculus

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