C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0009A2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm8 VISTA 9606 1:17846589-18449531
GeneTranscriptPositionBiotype
ENSG00000117154 (IGSF21)
immunoglobin superfamily, member 21 		ENST00000251296 (IGSF21-001) 18107746-18378482 protein_coding
ENST00000412684 (IGSF21-002) 18278845-18376367 protein_coding
ENST00000473951 (IGSF21-004) 18375957-18376920 processed_transcript
ENST00000497331 (IGSF21-003) 18361367-18378483 retained_intron
ENSG00000225387 (RP11-422P22.1)
 ENST00000420211 (RP11-422P22.1-001) 18385829-18388514 lincRNA
ENSG00000230035 (RP11-174G17)
 ENST00000419667 (RP11-174G17-001) 18166929-18179346 antisense
ENSG00000261781 (RP11-174G17.2)
 ENST00000569711 (RP11-174G17.2-001) 18065657-18074412 lincRNA
ENSG00000280222 (RP11-174G17.3)
 ENST00000624418 (RP11-174G17.3-001) 18109389-18115861 TEC
CIL_0009A2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm8 VISTA 10090 4:139918145-140519643
GeneTranscriptPositionBiotype
ENSMUSG00000040964 (Arhgef10l)
Rho guanine nucleotide exchange factor (GEF) 10-like 		ENSMUST00000039204 (Arhgef10l-007) 140514485-140648750 protein_coding
ENSMUST00000069623 (Arhgef10l-001) 140514485-140666012 protein_coding
ENSMUST00000097820 (Arhgef10l-002) 140514485-140648756 protein_coding
ENSMUST00000105797 (Arhgef10l-005) 140514485-140581818 protein_coding
ENSMUST00000105798 (Arhgef10l-004) 140514485-140584343 protein_coding
ENSMUST00000105799 (Arhgef10l-003) 140514485-140648750 protein_coding
ENSMUST00000125045 (Arhgef10l-011) 140580865-140592040 retained_intron
ENSMUST00000138493 (Arhgef10l-006) 140514485-140577094 nonsense_mediated_decay
ENSMUST00000140403 (Arhgef10l-010) 140544314-140568381 nonsense_mediated_decay
ENSMUST00000143614 (Arhgef10l-012) 140591932-140649360 protein_coding
ENSMUST00000147426 (Arhgef10l-009) 140575426-140581802 protein_coding
ENSMUST00000154979 (Arhgef10l-008) 140593169-140617065 protein_coding
ENSMUSG00000040972 (Igsf21)
immunoglobulin superfamily, member 21 		ENSMUST00000039331 (Igsf21-001) 140026846-140246784 protein_coding
ENSMUSG00000078234 (Klhdc7a)
kelch domain containing 7A 		ENSMUST00000105031 (Klhdc7a-001) 139960220-139968026 protein_coding
ENSMUSG00000085047 (Gm13026)
predicted gene 13026 		ENSMUST00000140113 (Gm13026-001) 140437963-140461291 lincRNA
ENSMUSG00000085928 (4933427I22Rik)
RIKEN cDNA 4933427I22 gene 		ENSMUST00000138672 (4933427I22Rik-002) 139926683-139933074 lincRNA
ENSMUST00000153921 (4933427I22Rik-001) 139926111-139943519 lincRNA
ENSMUSG00000085968 (Gm13027)
predicted gene 13027 		ENSMUST00000135858 (Gm13027-001) 140131877-140133351 antisense
ENSMUSG00000086164 (Gm13029)
predicted gene 13029 		ENSMUST00000137283 (Gm13029-001) 140142873-140144633 antisense
ENSMUSG00000086437 (Gm13021)
predicted gene 13021 		ENSMUST00000135716 (Gm13021-001) 140424644-140431931 lincRNA
ENSMUSG00000086960 (Gm13017)
predicted gene 13017 		ENSMUST00000156409 (Gm13017-001) 140391148-140396604 lincRNA
ENSMUSG00000087084 (Gm13016)
predicted gene 13016 		ENSMUST00000126252 (Gm13016-001) 140380630-140385574 lincRNA
ENSMUSG00000087628 (Gm13028)
predicted gene 13028 		ENSMUST00000128563 (Gm13028-001) 139923349-139933170 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009A2_0001ENSG00000117154ENST00000251296ENST00000412684ENST00000473951ENST00000497331ENSG00000225387ENST00000420211ENSG00000230035ENST00000419667ENSG00000261781ENST00000569711ENSG00000280222ENST00000624418CIL_0009A2_0002ENSMUSG00000040964ENSMUST00000039204ENSMUST00000069623ENSMUST00000097820ENSMUST00000105797ENSMUST00000105798ENSMUST00000105799ENSMUST00000125045ENSMUST00000138493ENSMUST00000140403ENSMUST00000143614ENSMUST00000147426ENSMUST00000154979ENSMUSG00000040972ENSMUST00000039331ENSMUSG00000078234ENSMUST00000105031ENSMUSG00000085047ENSMUST00000140113ENSMUSG00000085928ENSMUST00000138672ENSMUST00000153921ENSMUSG00000085968ENSMUST00000135858ENSMUSG00000086164ENSMUST00000137283ENSMUSG00000086437ENSMUST00000135716ENSMUSG00000086960ENSMUST00000156409ENSMUSG00000087084ENSMUST00000126252ENSMUSG00000087628ENSMUST00000128563
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009A2_0001ENSG00000117154ENST00000251296ENST00000412684ENST00000473951ENST00000497331ENSG00000225387ENST00000420211ENSG00000230035ENST00000419667ENSG00000261781ENST00000569711ENSG00000280222ENST00000624418CIL_0009A2_0002ENSMUSG00000040964ENSMUST00000039204ENSMUST00000069623ENSMUST00000097820ENSMUST00000105797ENSMUST00000105798ENSMUST00000105799ENSMUST00000125045ENSMUST00000138493ENSMUST00000147426ENSMUST00000154979ENSMUSG00000040972ENSMUST00000039331ENSMUSG00000078234ENSMUST00000105031ENSMUSG00000085047ENSMUST00000140113ENSMUSG00000085928ENSMUST00000138672ENSMUST00000153921ENSMUSG00000085968ENSMUST00000135858ENSMUSG00000086164ENSMUST00000137283ENSMUSG00000086437ENSMUST00000135716ENSMUSG00000086960ENSMUST00000156409ENSMUSG00000087084ENSMUST00000126252ENSMUSG00000087628ENSMUST00000128563
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000117154 ENST00000251296 1.470±0.00 N/A 0.304±0.00 7.344±4.84 0.634±0.00 N/A 0.438±0.40 3.498±0.00 0.786±0.00 1.495±0.00 N/A 0.448±0.14 1.178±0.81 0.312±0.03
ENST00000412684 N/A N/A N/A 4.748±0.00 0.879±0.00 N/A N/A N/A N/A 0.193±0.00 N/A 0.371±0.00 0.900±0.00 N/A
ENST00000473951 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.380±0.00 N/A N/A N/A N/A
ENST00000497331 N/A 0.253±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225387 ENST00000420211 N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 0.088±0.00
ENSG00000230035 ENST00000419667 N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.551±0.09
ENSG00000261781 ENST00000569711 N/A N/A N/A 0.019±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00
ENSG00000280222 ENST00000624418 0.030±0.00 0.059±0.00 N/A 0.068±0.04 0.068±0.00 0.012±0.00 0.046±0.03 0.061±0.03 0.016±0.01 0.071±0.00 0.070±0.00 0.044±0.05 0.018±0.01 0.024±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040964 ENSMUST00000039204 N/A N/A N/A 8.560±1.93 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.926±0.67
ENSMUST00000069623 1.976±0.14 1.311±0.00 5.050±1.23 N/A 8.258±2.92 13.728±2.18 N/A 4.730±0.44 N/A 3.503±0.61 4.811±0.20 3.445±1.32 0.800±0.08 N/A
ENSMUST00000097820 2.976±1.45 2.908±1.35 3.576±0.00 2.220±0.64 0.447±0.00 5.561±0.71 7.497±1.88 8.668±3.39 1.855±0.87 4.145±0.94 2.936±0.61 11.233±4.24 2.576±1.26 0.434±0.12
ENSMUST00000105797 N/A N/A N/A N/A 2.613±0.53 N/A 4.570±0.33 N/A 0.484±0.02 2.304±0.49 3.748±0.54 N/A N/A N/A
ENSMUST00000105798 N/A 0.847±0.00 N/A N/A 1.538±0.00 N/A 6.460±0.00 N/A 3.278±0.21 N/A 5.449±2.86 2.530±0.00 N/A 0.682±0.00
ENSMUST00000105799 N/A N/A N/A 3.470±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125045 N/A N/A N/A 13.222±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.825±0.00
ENSMUST00000138493 N/A 1.897±0.63 N/A 9.394±0.00 N/A 6.244±0.00 N/A N/A 3.351±0.25 N/A N/A 5.411±0.00 4.058±3.80 1.040±0.00
ENSMUST00000140403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147426 N/A N/A N/A N/A 9.507±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154979 N/A N/A N/A N/A N/A N/A N/A N/A 15.670±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000040972 ENSMUST00000039331 0.257±0.01 0.335±0.19 0.262±0.10 11.606±4.50 0.092±0.03 0.524±0.14 0.222±0.11 0.099±0.04 0.025±0.01 0.091±0.03 0.059±0.03 0.158±0.07 0.036±0.02 0.181±0.03
ENSMUSG00000078234 ENSMUST00000105031 26.041±11.28 12.882±3.58 6.769±4.22 0.954±1.05 23.529±8.90 3.502±0.82 1.460±0.73 20.646±3.49 1.986±1.62 4.417±0.38 0.157±0.14 5.849±1.62 0.240±0.18 0.359±0.31
ENSMUSG00000085047 ENSMUST00000140113 N/A N/A N/A 0.015±0.00 N/A 0.182±0.00 N/A N/A N/A N/A N/A N/A 0.138±0.12 N/A
ENSMUSG00000085928 ENSMUST00000138672 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.158±0.00 N/A N/A N/A 0.317±0.00
ENSMUST00000153921 0.034±0.02 N/A 0.006±0.00 0.062±0.02 0.060±0.03 N/A N/A N/A N/A 0.083±0.04 0.044±0.00 0.077±0.02 N/A 0.863±0.82
ENSMUSG00000085968 ENSMUST00000135858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.330±0.00
ENSMUSG00000086164 ENSMUST00000137283 N/A 0.191±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.154±0.07 0.136±0.06
ENSMUSG00000086437 ENSMUST00000135716 N/A N/A N/A N/A N/A N/A N/A N/A 0.326±0.00 0.512±0.16 N/A N/A N/A 0.455±0.16
ENSMUSG00000086960 ENSMUST00000156409 N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.01 N/A N/A N/A N/A N/A
ENSMUSG00000087084 ENSMUST00000126252 0.014±0.00 0.027±0.00 N/A 0.077±0.02 0.041±0.00 N/A N/A N/A N/A N/A N/A 0.058±0.01 0.014±0.01 0.077±0.04
ENSMUSG00000087628 ENSMUST00000128563 N/A N/A N/A 0.364±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading