C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RCAN family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117602 RCAN3 9606 + 1:24502351-24541040 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374393 RCAN3-201 24514314-24537019 protein_coding
  ENST00000374395 RCAN3-001 24502897-24541040 protein_coding
  ENST00000412742 RCAN3-202 24514314-24537019 protein_coding
  ENST00000425530 RCAN3-002 24507567-24514567 protein_coding
  ENST00000436717 RCAN3-203 24502897-24537019 protein_coding
  ENST00000482807 RCAN3-003 24533114-24535861 nonsense_mediated_decay
  ENST00000538532 RCAN3-204 24502351-24537019 protein_coding
  ENST00000610732 RCAN3-205 24507594-24537019 protein_coding
  ENST00000616511 RCAN3-206 24502897-24537019 protein_coding
  ENST00000618490 RCAN3-207 24502351-24537019 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374393ENST00000374395ENST00000412742ENST00000425530ENST00000436717ENST00000538532ENST00000610732ENST00000616511ENST00000618490
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.195±0.00 N/A N/A N/A
ENST00000374395 0.424±0.00 0.707±0.00 0.326±0.00 0.796±0.09 1.141±0.00 0.739±0.00 0.260±0.03 0.101±0.00 0.362±0.25 1.359±0.39 0.143±0.00 1.978±1.03 0.435±0.23 N/A
ENST00000412742 N/A N/A N/A N/A N/A N/A N/A N/A 0.516±0.39 N/A N/A N/A 0.317±0.00 N/A
ENST00000425530 N/A N/A N/A N/A N/A N/A 3.571±0.00 N/A 6.197±0.00 13.425±0.00 N/A N/A N/A N/A
ENST00000436717 N/A N/A N/A N/A N/A N/A 0.462±0.00 N/A N/A N/A N/A N/A 0.747±0.00 N/A
ENST00000538532 0.685±0.00 3.870±0.00 1.732±0.00 1.419±0.00 N/A 0.963±0.00 0.306±0.11 N/A N/A 1.221±0.00 N/A 4.992±0.77 1.983±0.00 1.145±0.00
ENST00000610732 N/A N/A N/A N/A 2.394±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616511 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.957±0.00 N/A N/A N/A N/A
ENST00000618490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.400±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 TAS RNA binding
GO:0009653 TAS anatomical structure morphogenesis
GO:0019722 IEA calcium-mediated signaling
GO:0031013 IPI troponin I binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032623 rcan3 regulator of calcineurin family member 3 protein_coding Danio_rerio
ENSMUSG00000059713 Rcan3 regulator of calcineurin 3 protein_coding Mus_musculus

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