C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulator of calcineurin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000059713 Rcan3 10090 - 4:135412308-135433853 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030606 Rcan3-001 135412308-135433853 protein_coding
  ENSMUST00000132654 Rcan3-003 135412308-135425267 protein_coding
  ENSMUST00000156635 Rcan3-002 135418443-135433823 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030606
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030606 5.475±1.91 6.125±1.55 7.999±0.19 8.523±3.92 6.040±1.26 8.104±2.61 1.807±0.63 4.157±1.51 1.075±0.50 6.295±0.65 0.866±0.35 5.614±2.23 4.513±2.02 0.855±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZX CIL_0007ZX_0002 VISTA 4:134905845-135507207
CIL_0007CU CIL_0007CU_0002 CGP 4:135412308-135495038

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0019722 IEA calcium-mediated signaling
GO:0031013 IEA troponin I binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032623 rcan3 regulator of calcineurin family member 3 protein_coding Danio_rerio
ENSG00000117602 RCAN3 RCAN family member 3 protein_coding Homo_sapiens

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