C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 8 (sodium/calcium exchanger), member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118160 SLC8A2 9606 - 19:47428017-47472168 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000236877 SLC8A2-001 47428017-47472168 protein_coding
  ENST00000539381 SLC8A2-004 47429740-47471863 processed_transcript
  ENST00000542837 SLC8A2-003 47428661-47471872 protein_coding
  ENST00000594353 SLC8A2-006 47457513-47471868 protein_coding
  ENST00000597014 SLC8A2-005 47465735-47471893 protein_coding
  ENST00000600576 SLC8A2-008 47430235-47432568 retained_intron
  ENST00000601757 SLC8A2-007 47432407-47447622 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000236877ENST00000539381ENST00000542837ENST00000594353ENST00000597014ENST00000600576ENST00000601757
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000236877 N/A N/A N/A 9.601±0.03 0.050±0.00 1.225±0.00 N/A N/A 0.008±0.00 0.148±0.02 0.121±0.04 0.249±0.00
ENST00000539381 N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A
ENST00000542837 0.069±0.00 N/A 0.021±0.00 16.361±0.00 N/A 1.093±0.98 0.042±0.00 0.017±0.00 N/A 0.061±0.04 N/A 1.156±0.20
ENST00000594353 N/A N/A N/A N/A 0.186±0.00 N/A N/A N/A N/A 0.898±0.00 0.331±0.00 N/A
ENST00000597014 0.114±0.00 0.105±0.00 N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A N/A
ENST00000600576 N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A 1.253±0.00
ENST00000601757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.315±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005432 IEA calcium:sodium antiporter activity
GO:0005516 IEA calmodulin binding
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006816 IEA calcium ion transport
GO:0007154 IEA cell communication
GO:0007596 TAS blood coagulation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0055085 IEA:TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008912 slc8a2a solute carrier family 8 (sodium-calcium exchanger), member 2a protein_coding Danio_rerio
ENSDARG00000040625 slc8a2b solute carrier family 8 (sodium-calcium exchanger), member 2b protein_coding Danio_rerio
ENSMUSG00000030376 Slc8a2 solute carrier family 8 (sodium/calcium exchanger), member 2 protein_coding Mus_musculus

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