C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cannabinoid receptor 1 (brain)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118432 CNR1 9606 - 6:88139864-88166359 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000362094 CNR1-003 88143856-88145274 protein_coding
  ENST00000369499 CNR1-006 88139876-88164343 protein_coding
  ENST00000369501 CNR1-001 88139864-88166359 protein_coding
  ENST00000428600 CNR1-005 88143856-88163024 protein_coding
  ENST00000468898 CNR1-004 88143856-88145274 protein_coding
  ENST00000549890 CNR1-002 88143244-88145365 protein_coding
  ENST00000551417 CNR1-007 88145041-88165915 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000362094ENST00000369499ENST00000369501ENST00000428600ENST00000468898ENST00000549890ENST00000551417
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000362094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A
ENST00000369499 N/A 0.069±0.00 6.654±0.00 N/A N/A 0.018±0.00 0.010±0.00 N/A N/A 0.008±0.00 0.046±0.02 0.521±0.00 N/A
ENST00000369501 14.208±0.00 N/A 2.912±0.83 0.390±0.00 5.300±0.00 N/A 0.178±0.00 0.291±0.00 N/A 0.344±0.00 0.210±0.00 0.891±0.80 1.112±0.00
ENST00000428600 N/A N/A N/A N/A N/A N/A N/A N/A 0.969±0.00 N/A N/A N/A N/A
ENST00000468898 N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000549890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.00
ENST00000551417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.442±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BR CIL_0006BR_0002 CGP 6:88139864-88963596

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002866 IEA positive regulation of acute inflammatory response to antigenic stimulus
GO:0004930 IEA G-protein coupled receptor activity
GO:0004949 IDA:IEA cannabinoid receptor activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007187 TAS G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger
GO:0007188 IDA adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007283 IEA spermatogenesis
GO:0007413 IEA axonal fasciculation
GO:0007568 IEA aging
GO:0007584 IEA response to nutrient
GO:0007611 IEA learning or memory
GO:0007613 IEA memory
GO:0008144 IEA drug binding
GO:0010976 IEA positive regulation of neuron projection development
GO:0016021 IEA integral component of membrane
GO:0019216 IEA regulation of lipid metabolic process
GO:0019233 IEA sensory perception of pain
GO:0030424 IEA axon
GO:0030426 IEA growth cone
GO:0031622 IEA positive regulation of fever generation
GO:0031999 IEA negative regulation of fatty acid beta-oxidation
GO:0032228 IEA regulation of synaptic transmission, GABAergic
GO:0032496 IEA response to lipopolysaccharide
GO:0033004 IEA negative regulation of mast cell activation
GO:0033602 IEA negative regulation of dopamine secretion
GO:0035094 IEA response to nicotine
GO:0042220 IEA response to cocaine
GO:0042593 IEA glucose homeostasis
GO:0043065 IEA positive regulation of apoptotic process
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043271 IEA negative regulation of ion transport
GO:0043278 IEA response to morphine
GO:0045471 IEA response to ethanol
GO:0045759 IEA negative regulation of action potential
GO:0045776 IEA negative regulation of blood pressure
GO:0045777 IEA positive regulation of blood pressure
GO:0050796 IEA regulation of insulin secretion
GO:0051001 IEA negative regulation of nitric-oxide synthase activity
GO:0051966 IEA regulation of synaptic transmission, glutamatergic
GO:0060135 IEA maternal process involved in female pregnancy
GO:0060259 IEA regulation of feeding behavior
GO:0060405 IEA regulation of penile erection

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009020 cnr1 cannabinoid receptor 1 protein_coding Danio_rerio
ENSMUSG00000044288 Cnr1 cannabinoid receptor 1 (brain) protein_coding Mus_musculus

Loading