C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: aldehyde dehydrogenase 8 family, member A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118514 ALDH8A1 9606 - 6:134917390-134950122 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265605 ALDH8A1-001 134917390-134950122 protein_coding
  ENST00000349305 ALDH8A1-004 134918160-134950089 nonsense_mediated_decay
  ENST00000367845 ALDH8A1-002 134917396-134950115 protein_coding
  ENST00000367847 ALDH8A1-006 134918173-134950084 protein_coding
  ENST00000460753 ALDH8A1-003 134918530-134929161 protein_coding
  ENST00000534012 ALDH8A1-007 134942493-134944235 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265605ENST00000349305ENST00000367845ENST00000367847ENST00000460753ENST00000534012
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265605 N/A N/A 2.154±0.00 0.275±0.00 N/A N/A N/A 11.911±7.89 20.920±0.00 N/A N/A 0.053±0.00 N/A N/A
ENST00000349305 N/A N/A N/A N/A N/A 0.244±0.00 0.042±0.00 N/A N/A N/A N/A 0.102±0.09 N/A N/A
ENST00000367845 0.050±0.00 N/A 4.976±0.00 N/A 0.105±0.03 0.098±0.00 0.013±0.00 16.296±0.47 16.730±0.00 N/A 0.005±0.00 0.081±0.05 0.121±0.00 N/A
ENST00000367847 N/A N/A 10.743±0.00 0.507±0.00 N/A N/A N/A 20.049±0.00 N/A N/A N/A 0.130±0.00 N/A N/A
ENST00000460753 N/A N/A N/A N/A N/A N/A 0.123±0.00 N/A N/A 0.981±0.58 N/A 0.390±0.00 N/A N/A
ENST00000534012 0.146±0.00 0.920±0.00 N/A N/A N/A 0.288±0.00 0.079±0.00 N/A N/A 0.314±0.00 N/A 0.599±0.00 N/A 0.237±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014R CIL_00014R_0002 CGP 6:134169246-134950122
CIL_00014Q CIL_00014Q_0002 CGP 6:134917390-135103056

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001758 IDA retinal dehydrogenase activity
GO:0005622 IDA intracellular
GO:0005737 IEA cytoplasm
GO:0008152 IEA metabolic process
GO:0016491 IEA oxidoreductase activity
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0042573 IDA retinoic acid metabolic process
GO:0042574 IDA retinal metabolic process
GO:0042904 IEA 9-cis-retinoic acid biosynthetic process
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036776 aldh8a1 aldehyde dehydrogenase 8 family, member A1 protein_coding Danio_rerio
ENSMUSG00000037542 Aldh8a1 aldehyde dehydrogenase 8 family, member A1 protein_coding Mus_musculus

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