C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: periplakin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118898 PPL 9606 - 16:4882507-4960741 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000345988 PPL-001 4882507-4937135 protein_coding
  ENST00000588556 PPL-005 4892755-4893821 retained_intron
  ENST00000589090 PPL-006 4888719-4890336 retained_intron
  ENST00000590093 PPL-004 4891443-4892179 retained_intron
  ENST00000590782 PPL-003 4882823-4937064 protein_coding
  ENST00000592772 PPL-002 4883572-4960741 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000345988ENST00000590782ENST00000592772
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000345988 19.441±0.00 1.442±0.00 0.585±0.00 6.145±0.00 4.551±2.29 13.673±0.00 1.150±0.68 4.871±0.00 6.068±1.53 9.102±4.90 3.003±2.47 15.508±12.40 5.876±1.39 6.546±5.64
ENST00000590782 6.967±0.00 1.751±0.00 2.078±0.00 0.561±0.00 2.323±0.00 0.509±0.00 N/A 2.746±0.00 N/A N/A N/A 7.247±6.26 1.043±0.00 N/A
ENST00000592772 N/A N/A N/A N/A N/A 0.430±0.00 N/A N/A N/A N/A 0.162±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FC CIL_0001FC_0001 CGP 16:4846665-4960741
CIL_00004R CIL_00004R_0001 CGP 16:4882507-5019158

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0030054 IEA cell junction
GO:0031424 IEA keratinization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037898 ppl periplakin protein_coding Danio_rerio
ENSMUSG00000039457 Ppl periplakin protein_coding Mus_musculus

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