C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: periplakin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000345988 PPL-001 ENSG00000118898 9606 - 16:4882507-4937135 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000345988
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000345988 19.441±0.00 1.442±0.00 0.585±0.00 6.145±0.00 4.551±2.29 13.673±0.00 1.150±0.68 4.871±0.00 6.068±1.53 9.102±4.90 3.003±2.47 15.508±12.40 5.876±1.39 6.546±5.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FC CIL_0001FC_0001 CGP 16:4846665-4960741
CIL_00004R CIL_00004R_0001 CGP 16:4882507-5019158

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0030054 IEA cell junction
GO:0031424 IEA keratinization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035672 Ppl-201 protein_coding Mus_musculus 0 5321

Loading