C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HCLS1 binding protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118960 HS1BP3 9606 - 2:20560448-20651089 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304031 HS1BP3-001 20617822-20651089 protein_coding
  ENST00000402541 HS1BP3-003 20634716-20651078 protein_coding
  ENST00000406618 HS1BP3-002 20640025-20651084 protein_coding
  ENST00000415264 HS1BP3-007 20592617-20624773 protein_coding
  ENST00000445102 HS1BP3-004 20622188-20624892 protein_coding
  ENST00000446825 HS1BP3-006 20560448-20651082 nonsense_mediated_decay
  ENST00000458740 HS1BP3-005 20622179-20638515 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304031ENST00000402541ENST00000446825
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304031 10.959±0.00 9.768±0.00 0.597±0.00 2.526±1.85 4.392±3.91 7.765±7.20 3.170±2.64 7.557±6.67 7.119±0.00 4.835±4.29 6.116±0.00 10.063±5.97 15.791±4.85 8.897±3.22
ENST00000402541 N/A N/A 0.626±0.00 N/A 0.331±0.00 0.626±0.00 0.310±0.00 0.452±0.00 1.051±0.00 0.361±0.00 N/A 0.728±0.18 0.796±0.00 0.828±0.00
ENST00000446825 N/A N/A N/A 1.007±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.759±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PO CIL_0008PO_0001 VISTA 2:20278534-20880046

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034222 HS1BP3 HCLS1 binding protein 3 protein_coding Danio_rerio
ENSMUSG00000020605 Hs1bp3 HCLS1 binding protein 3 protein_coding Mus_musculus

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