C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0008PO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2384 VISTA 9606 2:20278534-20880046
GeneTranscriptPositionBiotype
ENSG00000055917 (PUM2)
pumilio RNA-binding family member 2
ENST00000319801 (PUM2-201) 20248692-20327386 protein_coding
ENST00000338086 (PUM2-001) 20248691-20327383 protein_coding
ENST00000361078 (PUM2-202) 20248692-20350850 protein_coding
ENST00000403432 (PUM2-002) 20251310-20350702 protein_coding
ENST00000420234 (PUM2-007) 20308414-20350834 processed_transcript
ENST00000424110 (PUM2-009) 20318593-20350702 protein_coding
ENST00000429419 (PUM2-008) 20308490-20350621 nonsense_mediated_decay
ENST00000432105 (PUM2-005) 20311640-20352234 nonsense_mediated_decay
ENST00000440577 (PUM2-003) 20249864-20312256 protein_coding
ENST00000442400 (PUM2-006) 20307981-20352222 protein_coding
ENST00000446940 (PUM2-004) 20312299-20350301 nonsense_mediated_decay
ENSG00000118960 (HS1BP3)
HCLS1 binding protein 3
ENST00000304031 (HS1BP3-001) 20617822-20651089 protein_coding
ENST00000402541 (HS1BP3-003) 20634716-20651078 protein_coding
ENST00000406618 (HS1BP3-002) 20640025-20651084 protein_coding
ENST00000415264 (HS1BP3-007) 20592617-20624773 protein_coding
ENST00000445102 (HS1BP3-004) 20622188-20624892 protein_coding
ENST00000446825 (HS1BP3-006) 20560448-20651082 nonsense_mediated_decay
ENST00000458740 (HS1BP3-005) 20622179-20638515 protein_coding
ENSG00000118961 (C2orf43)
chromosome 2 open reading frame 43
ENST00000237822 (C2orf43-002) 20685054-20823114 protein_coding
ENST00000381090 (C2orf43-001) 20684044-20823114 protein_coding
ENST00000402479 (C2orf43-006) 20774858-20823089 protein_coding
ENST00000403006 (C2orf43-003) 20684028-20823104 protein_coding
ENST00000412261 (C2orf43-005) 20740052-20823122 protein_coding
ENST00000419825 (C2orf43-007) 20788889-20823110 protein_coding
ENST00000432947 (C2orf43-008) 20701575-20823101 protein_coding
ENST00000435420 (C2orf43-201) 20684014-20823130 protein_coding
ENST00000440866 (C2orf43-202) 20684014-20823130 protein_coding
ENST00000470099 (C2orf43-004) 20684412-20739991 retained_intron
ENST00000541941 (C2orf43-203) 20684014-20823130 protein_coding
ENST00000619656 (C2orf43-204) 20684014-20823130 protein_coding
ENSG00000143869 (GDF7)
growth differentiation factor 7
ENST00000272224 (GDF7-001) 20666664-20673658 protein_coding
ENSG00000143878 (RHOB)
ras homolog family member B
ENST00000272233 (RHOB-001) 20447074-20449445 protein_coding
ENSG00000227047 (AC012065.4)
ENST00000441870 (AC012065.4-001) 20499571-20501311 lincRNA
ENSG00000228950 (AC023137.2)
ENST00000448241 (AC023137.2-001) 20451042-20452947 lincRNA
ENSG00000231948 (HS1BP3-IT1)
HS1BP3 intronic transcript 1 (non-protein coding)
ENST00000449391 (HS1BP3-IT1-001) 20590775-20592548 sense_intronic
ENSG00000233416 (AC012065.5)
ENST00000421295 (AC012065.5-001) 20606280-20606654 processed_pseudogene
ENSG00000236436 (AC012361.1)
ENST00000447260 (AC012361.1-001) 20859771-20861661 lincRNA
ENSG00000260396 (AC012065.7)
ENST00000565841 (AC012065.7-001) 20677809-20679245 lincRNA
ENSG00000269976 (RP11-130L8.2)
ENST00000602736 (RP11-130L8.2-001) 20586248-20586686 lincRNA
ENSG00000270100 (RP11-130L8.1)
ENST00000602445 (RP11-130L8.1-001) 20678254-20678932 lincRNA
ENSG00000279307 (AC012065.1)
ENST00000624084 (AC012065.1-201) 20529470-20529976 processed_pseudogene
CIL_0008PO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2384 VISTA 10090 12:8085675-8687404
GeneTranscriptPositionBiotype
ENSMUSG00000020594 (Pum2)
pumilio RNA-binding family member 2
ENSMUST00000020915 (Pum2-003) 8674145-8750320 protein_coding
ENSMUST00000111122 (Pum2-001) 8674224-8752561 protein_coding
ENSMUST00000111123 (Pum2-002) 8674134-8751454 protein_coding
ENSMUST00000163569 (Pum2-006) 8674421-8750001 protein_coding
ENSMUST00000163730 (Pum2-014) 8674765-8713399 protein_coding
ENSMUST00000164818 (Pum2-013) 8729147-8748236 protein_coding
ENSMUST00000165293 (Pum2-004) 8674275-8752557 nonsense_mediated_decay
ENSMUST00000166965 (Pum2-010) 8677534-8709490 protein_coding
ENSMUST00000168361 (Pum2-201) 8674681-8752581 protein_coding
ENSMUST00000169089 (Pum2-005) 8674470-8750028 protein_coding
ENSMUST00000169177 (Pum2-008) 8674259-8707368 processed_transcript
ENSMUST00000169750 (Pum2-009) 8674736-8713630 protein_coding
ENSMUST00000170037 (Pum2-007) 8698096-8713913 nonsense_mediated_decay
ENSMUST00000171418 (Pum2-011) 8710226-8721797 protein_coding
ENSMUST00000171608 (Pum2-012) 8743476-8744395 retained_intron
ENSMUST00000178015 (Pum2-202) 8674134-8752581 protein_coding
ENSMUSG00000020600 (Slc7a15)
solute carrier family 7 (cationic amino acid transporter, y+ system), member 15
ENSMUST00000036938 (Slc7a15-001) 8528483-8599066 protein_coding
ENSMUST00000095863 (Slc7a15-002) 8529345-8539545 protein_coding
ENSMUST00000129465 (Slc7a15-003) 8538201-8539566 processed_transcript
ENSMUST00000165657 (Slc7a15-201) 8529345-8539545 protein_coding
ENSMUSG00000020605 (Hs1bp3)
HCLS1 binding protein 3
ENSMUST00000020927 (Hs1bp3-201) 8313433-8343824 protein_coding
ENSMUSG00000037660 (Gdf7)
growth differentiation factor 7
ENSMUST00000037313 (Gdf7-201) 8297934-8301954 protein_coding
ENSMUSG00000037669 (1110057K04Rik)
RIKEN cDNA 1110057K04 gene
ENSMUST00000037383 (1110057K04Rik-201) 8208107-8285758 protein_coding
ENSMUST00000169104 (1110057K04Rik-202) 8208127-8285758 protein_coding
ENSMUSG00000054364 (Rhob)
ras homolog gene family, member B
ENSMUST00000067384 (Rhob-201) 8497763-8499985 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008PO_0001ENSG00000055917ENST00000319801ENST00000338086ENST00000361078ENST00000403432ENST00000440577ENST00000442400ENSG00000118960ENST00000304031ENST00000402541ENST00000446825ENSG00000118961ENST00000237822ENST00000381090ENST00000403006ENST00000419825ENST00000432947ENST00000440866ENST00000470099ENST00000541941ENST00000619656ENSG00000143869ENST00000272224ENSG00000143878ENST00000272233ENSG00000227047ENST00000441870ENSG00000228950ENST00000448241ENSG00000231948ENST00000449391ENSG00000233416ENST00000421295ENSG00000236436ENST00000447260ENSG00000260396ENST00000565841ENSG00000269976ENST00000602736ENSG00000270100ENST00000602445ENSG00000279307ENST00000624084CIL_0008PO_0002ENSMUSG00000020594ENSMUST00000020915ENSMUST00000111122ENSMUST00000111123ENSMUST00000163569ENSMUST00000163730ENSMUST00000165293ENSMUST00000168361ENSMUST00000169089ENSMUST00000178015ENSMUSG00000020600ENSMUST00000036938ENSMUST00000129465ENSMUST00000165657ENSMUSG00000020605ENSMUST00000020927ENSMUSG00000037660ENSMUST00000037313ENSMUSG00000037669ENSMUST00000037383ENSMUST00000169104ENSMUSG00000054364ENSMUST00000067384
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000055917 ENST00000319801 N/A 4.469±0.00 N/A 2.552±0.61 1.195±0.00 N/A 1.678±0.94 N/A N/A N/A N/A 6.641±0.00 1.899±0.11 N/A
ENST00000338086 N/A 2.978±0.00 N/A N/A 1.879±0.08 8.399±0.00 4.917±0.00 4.907±1.75 3.090±2.24 5.191±0.00 4.901±0.00 4.607±0.00 3.142±1.48 4.213±0.10
ENST00000361078 N/A 2.241±0.00 N/A N/A 2.139±0.00 3.870±0.00 N/A N/A 2.706±0.03 3.117±0.00 N/A 4.246±0.00 N/A 2.514±0.00
ENST00000403432 N/A N/A 5.271±0.00 3.287±0.00 5.750±0.00 9.288±0.00 3.046±0.00 2.250±0.00 6.310±0.00 5.869±0.00 3.774±0.00 5.362±0.17 N/A N/A
ENST00000420234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440577 N/A N/A N/A 2.144±0.00 2.807±0.70 5.628±0.00 1.292±0.00 4.783±0.00 3.899±0.00 4.417±0.00 2.162±0.00 12.097±0.00 13.307±0.00 8.754±5.21
ENST00000442400 N/A N/A N/A N/A N/A 14.462±0.00 4.684±0.00 7.080±0.00 N/A N/A N/A N/A N/A N/A
ENST00000446940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000118960 ENST00000304031 10.959±0.00 9.768±0.00 0.597±0.00 2.526±1.85 4.392±3.91 7.765±7.20 3.170±2.64 7.557±6.67 7.119±0.00 4.835±4.29 6.116±0.00 10.063±5.97 15.791±4.85 8.897±3.22
ENST00000402541 N/A N/A 0.626±0.00 N/A 0.331±0.00 0.626±0.00 0.310±0.00 0.452±0.00 1.051±0.00 0.361±0.00 N/A 0.728±0.18 0.796±0.00 0.828±0.00
ENST00000406618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446825 N/A N/A N/A 1.007±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.759±0.00
ENST00000458740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000118961 ENST00000237822 1.400±0.00 N/A 0.383±0.00 0.903±0.15 1.335±0.26 1.152±0.20 0.511±0.28 1.859±0.85 1.181±0.28 0.578±0.16 0.142±0.00 1.882±0.21 1.754±0.15 1.004±0.62
ENST00000381090 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.724±0.00 N/A 1.145±0.00 0.761±0.00 N/A
ENST00000402479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000403006 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.386±0.00 N/A N/A 0.654±0.00 N/A
ENST00000412261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.323±0.00 N/A N/A N/A
ENST00000432947 N/A N/A N/A N/A N/A N/A N/A 1.920±0.00 N/A N/A N/A N/A N/A N/A
ENST00000435420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440866 N/A 0.808±0.00 0.365±0.00 0.316±0.00 0.874±0.00 N/A 0.226±0.00 0.635±0.00 0.355±0.00 0.306±0.00 N/A 0.640±0.00 0.302±0.00 N/A
ENST00000470099 N/A N/A N/A N/A N/A N/A N/A N/A 0.678±0.00 0.364±0.00 0.161±0.00 N/A 0.558±0.00 N/A
ENST00000541941 N/A 0.448±0.00 N/A N/A N/A 0.566±0.00 N/A N/A N/A 0.856±0.00 N/A 0.885±0.05 1.277±0.00 0.620±0.19
ENST00000619656 N/A 0.501±0.00 N/A N/A 0.598±0.00 0.903±0.00 N/A 1.310±0.00 0.651±0.00 N/A N/A 1.275±0.00 N/A N/A
ENSG00000143869 ENST00000272224 0.078±0.00 N/A 1.315±0.00 0.173±0.03 0.273±0.25 0.269±0.02 0.129±0.08 1.005±0.31 0.925±0.56 0.166±0.03 0.048±0.00 0.074±0.05 0.412±0.25 0.328±0.00
ENSG00000143878 ENST00000272233 336.460±0.00 247.900±0.00 16.056±0.00 144.571±102.22 122.966±87.71 119.130±97.82 57.700±30.67 101.671±53.07 120.107±39.31 239.815±191.95 63.127±37.55 150.287±131.00 211.187±72.22 112.212±93.05
ENSG00000227047 ENST00000441870 N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A
ENSG00000228950 ENST00000448241 N/A 0.381±0.00 N/A 0.461±0.00 N/A N/A N/A 0.109±0.00 0.095±0.00 N/A N/A N/A N/A N/A
ENSG00000231948 ENST00000449391 0.236±0.00 0.459±0.00 0.401±0.00 0.290±0.00 0.416±0.00 0.203±0.00 0.100±0.00 0.825±0.00 N/A 0.067±0.00 N/A 0.279±0.09 0.361±0.08 N/A
ENSG00000233416 ENST00000421295 0.037±0.00 0.039±0.00 0.440±0.00 0.518±0.20 0.451±0.30 0.439±0.10 0.250±0.00 0.114±0.00 1.211±0.00 0.105±0.07 0.171±0.00 0.744±0.69 0.160±0.00 0.044±0.01
ENSG00000236436 ENST00000447260 N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.030±0.01
ENSG00000260396 ENST00000565841 N/A 1.703±0.00 N/A 0.195±0.06 0.130±0.04 0.136±0.01 0.176±0.00 0.592±0.51 0.768±0.00 0.349±0.00 N/A 0.117±0.07 0.194±0.16 0.177±0.01
ENSG00000269976 ENST00000602736 0.453±0.00 0.277±0.00 N/A 0.269±0.00 0.683±0.00 0.436±0.00 0.089±0.00 1.900±0.01 31.736±0.00 N/A N/A 0.732±0.20 0.857±0.46 0.316±0.17
ENSG00000270100 ENST00000602445 0.072±0.00 5.205±0.00 0.780±0.00 N/A 0.620±0.00 0.239±0.00 0.313±0.00 2.606±1.13 2.382±0.00 0.422±0.20 N/A 0.621±0.45 0.977±0.65 0.586±0.20
ENSG00000279307 ENST00000624084 N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A 0.089±0.00 N/A 0.020±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020594 ENSMUST00000020915 N/A N/A N/A N/A 7.262±0.10 4.824±0.00 3.706±0.00 N/A N/A N/A N/A 10.368±0.75 N/A N/A
ENSMUST00000111122 7.932±0.99 6.106±0.95 8.740±0.14 13.715±1.07 4.428±0.00 4.220±0.89 5.487±1.74 8.465±1.40 6.239±3.47 8.365±0.00 3.176±1.02 4.963±0.03 9.580±3.23 2.796±0.47
ENSMUST00000111123 N/A N/A N/A 7.728±0.00 N/A N/A N/A N/A N/A N/A N/A 9.597±0.00 5.607±0.81 3.189±0.00
ENSMUST00000163569 4.264±0.24 N/A N/A N/A 8.821±2.47 7.204±3.18 N/A 4.132±0.00 N/A 5.155±0.00 N/A 18.797±7.72 5.559±0.00 7.692±0.66
ENSMUST00000163730 N/A N/A N/A 51.734±0.00 N/A N/A N/A N/A N/A N/A N/A 46.731±0.00 37.332±0.40 15.098±0.00
ENSMUST00000164818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165293 N/A N/A N/A 4.414±0.47 N/A N/A 3.950±1.09 3.216±0.00 1.317±0.00 N/A 5.051±0.88 N/A N/A 2.202±0.06
ENSMUST00000166965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168361 N/A N/A N/A N/A 9.213±0.00 N/A N/A N/A 2.872±0.11 6.002±0.00 N/A 8.348±3.23 N/A N/A
ENSMUST00000169089 11.478±3.10 19.955±6.12 N/A N/A 15.936±4.01 13.151±3.32 5.861±0.50 8.499±1.13 4.413±0.40 16.419±4.02 N/A 16.714±6.27 N/A 4.447±1.14
ENSMUST00000169177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178015 3.424±0.00 11.653±0.00 10.272±4.82 15.574±3.85 N/A N/A 4.273±0.88 4.334±0.64 6.014±1.46 6.306±1.31 2.317±0.52 9.623±3.10 8.610±1.30 N/A
ENSMUSG00000020600 ENSMUST00000036938 0.010±0.00 N/A N/A 0.022±0.00 0.054±0.02 0.043±0.01 N/A 0.086±0.03 0.035±0.02 0.032±0.01 0.035±0.01 0.113±0.07 0.082±0.04 0.144±0.12
ENSMUST00000095863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129465 0.192±0.03 N/A 0.050±0.00 0.032±0.00 0.197±0.01 0.148±0.08 0.071±0.04 0.143±0.02 0.150±0.17 0.126±0.04 0.199±0.09 0.209±0.06 0.109±0.09 1.216±1.17
ENSMUST00000165657 0.055±0.01 N/A N/A 0.023±0.00 N/A 0.100±0.01 0.019±0.00 0.137±0.05 0.022±0.01 0.021±0.00 N/A 0.175±0.10 0.050±0.00 1.282±1.08
ENSMUSG00000020605 ENSMUST00000020927 11.230±2.16 11.193±0.60 8.071±0.15 2.770±0.69 12.280±3.89 9.904±1.81 4.472±1.16 9.235±1.65 4.788±2.36 9.591±2.01 1.775±0.38 10.439±3.79 9.446±4.30 0.476±0.26
ENSMUSG00000037660 ENSMUST00000037313 0.072±0.02 0.171±0.07 0.032±0.00 0.410±0.13 0.132±0.07 0.682±0.16 0.389±0.12 0.692±0.19 0.025±0.01 0.127±0.04 0.093±0.00 2.932±2.24 0.128±0.08 0.092±0.04
ENSMUSG00000037669 ENSMUST00000037383 8.848±4.04 1.481±0.00 6.400±0.60 3.058±0.10 9.112±5.30 2.822±0.53 2.627±0.56 4.935±1.45 3.847±1.56 2.735±1.41 1.307±0.80 3.798±2.36 3.198±1.98 1.760±0.34
ENSMUST00000169104 12.359±4.70 11.904±2.65 7.041±0.86 2.224±0.63 7.489±2.37 6.768±3.02 5.178±1.06 5.855±1.59 6.150±3.35 5.612±0.60 1.123±0.08 8.840±3.11 5.427±0.99 1.622±0.76
ENSMUSG00000054364 ENSMUST00000067384 204.701±17.34 238.718±40.14 103.389±22.26 76.457±23.87 143.370±64.63 216.577±23.46 83.073±14.18 66.013±6.10 14.080±4.86 196.319±47.90 14.234±2.35 148.284±68.48 67.141±27.58 7.533±4.10

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