C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 2 open reading frame 43
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118961 C2orf43 9606 - 2:20684014-20823130 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000237822 C2orf43-002 20685054-20823114 protein_coding
  ENST00000381090 C2orf43-001 20684044-20823114 protein_coding
  ENST00000402479 C2orf43-006 20774858-20823089 protein_coding
  ENST00000403006 C2orf43-003 20684028-20823104 protein_coding
  ENST00000412261 C2orf43-005 20740052-20823122 protein_coding
  ENST00000419825 C2orf43-007 20788889-20823110 protein_coding
  ENST00000432947 C2orf43-008 20701575-20823101 protein_coding
  ENST00000435420 C2orf43-201 20684014-20823130 protein_coding
  ENST00000440866 C2orf43-202 20684014-20823130 protein_coding
  ENST00000470099 C2orf43-004 20684412-20739991 retained_intron
  ENST00000541941 C2orf43-203 20684014-20823130 protein_coding
  ENST00000619656 C2orf43-204 20684014-20823130 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000237822ENST00000381090ENST00000403006ENST00000419825ENST00000432947ENST00000440866ENST00000470099ENST00000541941ENST00000619656
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000237822 1.400±0.00 N/A 0.383±0.00 0.903±0.15 1.335±0.26 1.152±0.20 0.511±0.28 1.859±0.85 1.181±0.28 0.578±0.16 0.142±0.00 1.882±0.21 1.754±0.15 1.004±0.62
ENST00000381090 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.724±0.00 N/A 1.145±0.00 0.761±0.00 N/A
ENST00000403006 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.386±0.00 N/A N/A 0.654±0.00 N/A
ENST00000419825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.323±0.00 N/A N/A N/A
ENST00000432947 N/A N/A N/A N/A N/A N/A N/A 1.920±0.00 N/A N/A N/A N/A N/A N/A
ENST00000440866 N/A 0.808±0.00 0.365±0.00 0.316±0.00 0.874±0.00 N/A 0.226±0.00 0.635±0.00 0.355±0.00 0.306±0.00 N/A 0.640±0.00 0.302±0.00 N/A
ENST00000470099 N/A N/A N/A N/A N/A N/A N/A N/A 0.678±0.00 0.364±0.00 0.161±0.00 N/A 0.558±0.00 N/A
ENST00000541941 N/A 0.448±0.00 N/A N/A N/A 0.566±0.00 N/A N/A N/A 0.856±0.00 N/A 0.885±0.05 1.277±0.00 0.620±0.19
ENST00000619656 N/A 0.501±0.00 N/A N/A 0.598±0.00 0.903±0.00 N/A 1.310±0.00 0.651±0.00 N/A N/A 1.275±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PO CIL_0008PO_0001 VISTA 2:20278534-20880046

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079796 C17H2orf43 chromosome 2 open reading frame 43 protein_coding Danio_rerio
ENSMUSG00000037669 1110057K04Rik RIKEN cDNA 1110057K04 gene protein_coding Mus_musculus

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