C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 1 open reading frame 198
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119280 C1orf198 9606 - 1:230837119-230869589 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000366663 C1orf198-001 230837119-230868653 protein_coding
  ENST00000427697 C1orf198-004 230837120-230869316 protein_coding
  ENST00000470540 C1orf198-002 230837119-230869589 protein_coding
  ENST00000519360 C1orf198-007 230843837-230856134 retained_intron
  ENST00000521263 C1orf198-005 230868443-230869570 retained_intron
  ENST00000522201 C1orf198-006 230843671-230868998 protein_coding
  ENST00000523410 C1orf198-003 230839621-230856036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366663ENST00000427697ENST00000470540ENST00000522201ENST00000523410
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366663 24.372±0.00 16.489±0.00 2.091±0.00 30.111±20.76 24.653±19.98 10.978±8.62 9.733±6.94 7.255±6.08 5.770±3.86 30.195±17.69 21.840±18.48 13.229±6.53 19.994±5.43 12.272±0.00
ENST00000427697 N/A N/A N/A N/A N/A N/A N/A N/A 0.461±0.00 N/A N/A 7.132±0.00 N/A 2.079±0.00
ENST00000470540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.150±0.00 N/A N/A
ENST00000522201 N/A N/A 7.481±0.00 17.286±0.00 9.067±0.00 5.910±0.00 8.318±0.00 N/A 19.316±0.00 13.055±0.00 8.437±0.00 11.985±0.00 N/A N/A
ENST00000523410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.435±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WK CIL_0007WK_0001 VISTA 1:230548777-231152235
CIL_000616 CIL_000616_0001 CGP 1:230747384-230869589
CIL_000613 CIL_000613_0001 CGP 1:230837119-230978875

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043842 C20H1orf198 chromosome 1 open reading frame 198 protein_coding Danio_rerio
ENSMUSG00000031983 2310022B05Rik RIKEN cDNA 2310022B05 gene protein_coding Mus_musculus

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