C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000616_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135773-ENSG00000119280 CGP 9606 1:230747384-230869589
GeneTranscriptPositionBiotype
ENSG00000119280 (C1orf198)
chromosome 1 open reading frame 198 		ENST00000366663 (C1orf198-001) 230837119-230868653 protein_coding
ENST00000427697 (C1orf198-004) 230837120-230869316 protein_coding
ENST00000470540 (C1orf198-002) 230837119-230869589 protein_coding
ENST00000519360 (C1orf198-007) 230843837-230856134 retained_intron
ENST00000521263 (C1orf198-005) 230868443-230869570 retained_intron
ENST00000522201 (C1orf198-006) 230843671-230868998 protein_coding
ENST00000523410 (C1orf198-003) 230839621-230856036 protein_coding
ENSG00000135773 (CAPN9)
calpain 9 		ENST00000271971 (CAPN9-001) 230747384-230801772 protein_coding
ENST00000354537 (CAPN9-002) 230747415-230802003 protein_coding
ENST00000366666 (CAPN9-201) 230747384-230801772 protein_coding
ENST00000480004 (CAPN9-003) 230791877-230801762 processed_transcript
ENSG00000225656 (RP5-858B6.1)
 ENST00000436739 (RP5-858B6.1-001) 230823641-230824707 lincRNA
CIL_000616_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031981-ENSMUSG00000031983 CGP 10090 8:124576111-124663369
GeneTranscriptPositionBiotype
ENSMUSG00000031981 (Capn9)
calpain 9 		ENSMUST00000093033 (Capn9-001) 124576111-124618731 protein_coding
ENSMUST00000133086 (Capn9-002) 124576113-124591725 protein_coding
ENSMUST00000133583 (Capn9-003) 124613440-124614626 processed_transcript
ENSMUSG00000031983 (2310022B05Rik)
RIKEN cDNA 2310022B05 gene 		ENSMUST00000034464 (2310022B05Rik-201) 124635766-124663369 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000616_0001ENSG00000119280ENST00000366663ENST00000427697ENST00000470540ENST00000519360ENST00000521263ENST00000522201ENST00000523410ENSG00000135773ENST00000271971ENST00000354537ENST00000366666ENST00000480004ENSG00000225656ENST00000436739CIL_000616_0002ENSMUSG00000031981ENSMUST00000093033ENSMUST00000133086ENSMUST00000133583ENSMUSG00000031983ENSMUST00000034464
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000616_0001ENSG00000119280ENST00000366663ENST00000427697ENST00000470540ENST00000522201ENST00000523410ENSG00000135773ENST00000271971ENST00000354537ENSG00000225656ENST00000436739CIL_000616_0002ENSMUSG00000031981ENSMUST00000093033ENSMUST00000133086ENSMUST00000133583ENSMUSG00000031983ENSMUST00000034464
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119280 ENST00000366663 24.372±0.00 16.489±0.00 2.091±0.00 30.111±20.76 24.653±19.98 10.978±8.62 9.733±6.94 7.255±6.08 5.770±3.86 30.195±17.69 21.840±18.48 13.229±6.53 19.994±5.43 12.272±0.00
ENST00000427697 N/A N/A N/A N/A N/A N/A N/A N/A 0.461±0.00 N/A N/A 7.132±0.00 N/A 2.079±0.00
ENST00000470540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.150±0.00 N/A N/A
ENST00000519360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522201 N/A N/A 7.481±0.00 17.286±0.00 9.067±0.00 5.910±0.00 8.318±0.00 N/A 19.316±0.00 13.055±0.00 8.437±0.00 11.985±0.00 N/A N/A
ENST00000523410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.435±0.00 N/A N/A N/A
ENSG00000135773 ENST00000271971 N/A N/A N/A N/A N/A N/A N/A N/A 0.289±0.00 2.425±0.00 N/A 0.247±0.00 N/A N/A
ENST00000354537 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.417±0.00 N/A 0.076±0.00 N/A N/A
ENST00000366666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225656 ENST00000436739 N/A N/A N/A 0.075±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031981 ENSMUST00000093033 0.119±0.04 0.099±0.07 0.014±0.01 0.017±0.00 0.050±0.01 14.917±3.54 0.032±0.01 0.023±0.01 0.009±0.00 0.100±0.03 0.023±0.00 0.116±0.06 0.040±0.02 0.240±0.13
ENSMUST00000133086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.129±0.00 N/A N/A
ENSMUST00000133583 N/A N/A N/A 0.308±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.453±0.04 N/A
ENSMUSG00000031983 ENSMUST00000034464 24.211±8.63 20.166±1.83 17.694±3.79 22.626±7.34 12.187±0.86 22.784±1.74 24.050±3.33 18.874±1.65 5.896±1.79 34.711±2.92 3.466±0.37 28.024±10.43 15.557±5.33 6.471±2.89

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