C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000120008 WDR11 9606 + 10:120851175-120909524 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263461 WDR11-001 120851175-120909524 protein_coding
  ENST00000462529 WDR11-005 120862450-120865191 processed_transcript
  ENST00000470052 WDR11-004 120851781-120858796 processed_transcript
  ENST00000478567 WDR11-003 120885868-120903225 processed_transcript
  ENST00000497136 WDR11-002 120852616-120909520 nonsense_mediated_decay
  ENST00000603658 WDR11-014 120904065-120905656 retained_intron
  ENST00000604220 WDR11-018 120868663-120883805 processed_transcript
  ENST00000604509 WDR11-006 120879005-120909510 processed_transcript
  ENST00000604585 WDR11-016 120851487-120880875 protein_coding
  ENST00000604714 WDR11-012 120907295-120909523 processed_transcript
  ENST00000605069 WDR11-008 120851392-120862910 processed_transcript
  ENST00000605178 WDR11-010 120851404-120862909 processed_transcript
  ENST00000605202 WDR11-009 120851305-120860270 processed_transcript
  ENST00000605320 WDR11-015 120899838-120903175 processed_transcript
  ENST00000605376 WDR11-011 120885010-120889968 processed_transcript
  ENST00000605543 WDR11-007 120851362-120909182 nonsense_mediated_decay
  ENST00000605659 WDR11-013 120904041-120905395 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263461ENST00000470052ENST00000478567ENST00000497136ENST00000604585ENST00000604714ENST00000605069ENST00000605376ENST00000605543
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263461 2.710±0.00 6.128±0.00 N/A 2.067±0.00 2.605±0.57 1.993±0.26 0.766±0.52 3.717±1.71 1.295±0.02 1.185±0.56 0.299±0.00 3.788±1.62 3.211±1.82 2.637±0.00
ENST00000470052 N/A N/A 7.465±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478567 N/A N/A 5.244±0.00 N/A 13.730±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497136 1.109±0.00 N/A 1.010±0.00 2.396±0.00 2.633±0.61 0.685±0.00 0.493±0.27 1.527±0.00 1.151±0.63 2.228±1.54 0.403±0.05 3.541±1.84 N/A 1.110±0.20
ENST00000604585 N/A N/A 3.779±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604714 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.078±0.00 N/A N/A N/A N/A
ENST00000605069 N/A N/A N/A N/A N/A 18.982±0.00 3.562±0.00 N/A 17.465±0.00 N/A N/A 22.012±0.00 N/A N/A
ENST00000605376 N/A N/A N/A N/A N/A 16.869±0.00 N/A 10.701±0.00 N/A N/A N/A N/A N/A N/A
ENST00000605543 N/A N/A N/A 3.130±0.00 N/A N/A 1.276±0.00 4.971±0.00 N/A 0.740±0.00 N/A 4.682±1.39 4.361±0.00 4.792±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WK CIL_0002WK_0001 CGP 10:120456954-120909524
CIL_0008MH CIL_0008MH_0001 VISTA 10:120742372-121343942
CIL_0002WI CIL_0002WI_0001 CGP 10:120851175-121598458

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005765 IDA lysosomal membrane
GO:0005929 IEA cilium
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075245 wdr11 WD repeat domain 11 protein_coding Danio_rerio
ENSMUSG00000042055 Wdr11 WD repeat domain 11 protein_coding Mus_musculus

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