C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002WK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000203805-ENSG00000120008 CGP 9606 10:120456954-120909524
GeneTranscriptPositionBiotype
ENSG00000120008 (WDR11)
WD repeat domain 11 		ENST00000263461 (WDR11-001) 120851175-120909524 protein_coding
ENST00000462529 (WDR11-005) 120862450-120865191 processed_transcript
ENST00000470052 (WDR11-004) 120851781-120858796 processed_transcript
ENST00000478567 (WDR11-003) 120885868-120903225 processed_transcript
ENST00000497136 (WDR11-002) 120852616-120909520 nonsense_mediated_decay
ENST00000603658 (WDR11-014) 120904065-120905656 retained_intron
ENST00000604220 (WDR11-018) 120868663-120883805 processed_transcript
ENST00000604509 (WDR11-006) 120879005-120909510 processed_transcript
ENST00000604585 (WDR11-016) 120851487-120880875 protein_coding
ENST00000604714 (WDR11-012) 120907295-120909523 processed_transcript
ENST00000605069 (WDR11-008) 120851392-120862910 processed_transcript
ENST00000605178 (WDR11-010) 120851404-120862909 processed_transcript
ENST00000605202 (WDR11-009) 120851305-120860270 processed_transcript
ENST00000605320 (WDR11-015) 120899838-120903175 processed_transcript
ENST00000605376 (WDR11-011) 120885010-120889968 processed_transcript
ENST00000605543 (WDR11-007) 120851362-120909182 nonsense_mediated_decay
ENST00000605659 (WDR11-013) 120904041-120905395 processed_transcript
ENSG00000177234 (C10orf85)
long intergenic non-protein coding RNA 1561 		ENST00000369071 (C10orf85-001) 120597949-120600124 lincRNA
ENST00000623529 (C10orf85-201) 120597949-120600108 lincRNA
ENSG00000203805 (PPAPDC1A)
phosphatidic acid phosphatase type 2 domain containing 1A 		ENST00000369073 (PPAPDC1A-001) 120503579-120589851 protein_coding
ENST00000398250 (PPAPDC1A-201) 120456954-120589855 protein_coding
ENST00000427079 (PPAPDC1A-002) 120457222-120589487 protein_coding
ENST00000496437 (PPAPDC1A-003) 120575188-120587496 processed_transcript
ENSG00000265239 (AC073587.1)
 ENST00000580337 (AC073587.1-201) 120463834-120463931 miRNA
ENSG00000271670 (RP11-95I16.4)
 ENST00000605549 (RP11-95I16.4-001) 120879256-120880667 antisense
ENSG00000274461 (RP11-323P17.2)
 ENST00000613658 (RP11-323P17.2-001) 120819307-120824994 lincRNA
ENST00000617518 (RP11-323P17.2-002) 120820377-120824433 lincRNA
ENST00000618591 (RP11-323P17.2-003) 120824135-120825311 retained_intron
CIL_0002WK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070366-ENSMUSG00000042055 CGP 10090 7:129257094-129635738
GeneTranscriptPositionBiotype
ENSMUSG00000042055 (Wdr11)
WD repeat domain 11 		ENSMUST00000084519 (Wdr11-001) 129591863-129635738 protein_coding
ENSMUST00000136560 (Wdr11-008) 129629033-129633671 processed_transcript
ENSMUST00000136734 (Wdr11-003) 129591918-129612302 retained_intron
ENSMUST00000140877 (Wdr11-005) 129625056-129635734 retained_intron
ENSMUST00000143422 (Wdr11-002) 129591908-129625640 retained_intron
ENSMUST00000143849 (Wdr11-007) 129605076-129607808 processed_transcript
ENSMUST00000148752 (Wdr11-004) 129593068-129632859 processed_transcript
ENSMUST00000149541 (Wdr11-006) 129606569-129635736 retained_intron
ENSMUSG00000070366 (Ppapdc1a)
phosphatidic acid phosphatase type 2 domain containing 1A 		ENSMUST00000094018 (Ppapdc1a-201) 129257094-129391307 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002WK_0001ENSG00000120008ENST00000263461ENST00000462529ENST00000470052ENST00000478567ENST00000497136ENST00000603658ENST00000604220ENST00000604509ENST00000604585ENST00000604714ENST00000605069ENST00000605178ENST00000605202ENST00000605320ENST00000605376ENST00000605543ENST00000605659ENSG00000177234ENST00000369071ENST00000623529ENSG00000203805ENST00000369073ENST00000398250ENST00000427079ENST00000496437ENSG00000265239ENST00000580337ENSG00000271670ENST00000605549ENSG00000274461ENST00000613658ENST00000617518ENST00000618591CIL_0002WK_0002ENSMUSG00000042055ENSMUST00000084519ENSMUST00000136560ENSMUST00000136734ENSMUST00000140877ENSMUST00000143422ENSMUST00000143849ENSMUST00000148752ENSMUST00000149541ENSMUSG00000070366ENSMUST00000094018
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002WK_0001ENSG00000120008ENST00000263461ENST00000470052ENST00000478567ENST00000497136ENST00000604585ENST00000604714ENST00000605069ENST00000605376ENST00000605543ENSG00000177234ENST00000369071ENST00000623529ENSG00000203805ENST00000369073ENST00000398250ENST00000427079ENST00000496437ENSG00000265239ENST00000580337ENSG00000271670ENST00000605549ENSG00000274461ENST00000613658ENST00000617518ENST00000618591CIL_0002WK_0002ENSMUSG00000042055ENSMUST00000084519ENSMUST00000136560ENSMUST00000136734ENSMUST00000140877ENSMUST00000148752ENSMUST00000149541ENSMUSG00000070366ENSMUST00000094018
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120008 ENST00000263461 2.710±0.00 6.128±0.00 N/A 2.067±0.00 2.605±0.57 1.993±0.26 0.766±0.52 3.717±1.71 1.295±0.02 1.185±0.56 0.299±0.00 3.788±1.62 3.211±1.82 2.637±0.00
ENST00000462529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470052 N/A N/A 7.465±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478567 N/A N/A 5.244±0.00 N/A 13.730±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497136 1.109±0.00 N/A 1.010±0.00 2.396±0.00 2.633±0.61 0.685±0.00 0.493±0.27 1.527±0.00 1.151±0.63 2.228±1.54 0.403±0.05 3.541±1.84 N/A 1.110±0.20
ENST00000603658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604585 N/A N/A 3.779±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604714 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.078±0.00 N/A N/A N/A N/A
ENST00000605069 N/A N/A N/A N/A N/A 18.982±0.00 3.562±0.00 N/A 17.465±0.00 N/A N/A 22.012±0.00 N/A N/A
ENST00000605178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605376 N/A N/A N/A N/A N/A 16.869±0.00 N/A 10.701±0.00 N/A N/A N/A N/A N/A N/A
ENST00000605543 N/A N/A N/A 3.130±0.00 N/A N/A 1.276±0.00 4.971±0.00 N/A 0.740±0.00 N/A 4.682±1.39 4.361±0.00 4.792±0.00
ENST00000605659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177234 ENST00000369071 N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000623529 N/A N/A 0.014±0.00 0.506±0.34 N/A 0.154±0.00 N/A 0.340±0.00 0.021±0.00 N/A N/A 0.055±0.00 N/A 0.221±0.08
ENSG00000203805 ENST00000369073 0.101±0.00 N/A N/A 1.732±0.00 0.056±0.00 N/A 0.040±0.00 1.704±0.00 N/A N/A N/A 0.285±0.15 0.101±0.05 1.295±0.19
ENST00000398250 N/A N/A N/A 2.676±0.00 N/A 1.340±0.00 N/A 0.694±0.00 0.209±0.00 0.060±0.00 N/A N/A N/A 2.229±1.60
ENST00000427079 N/A N/A 1.328±0.00 1.340±0.82 N/A 0.656±0.00 N/A 0.281±0.00 0.583±0.00 0.089±0.00 N/A 0.284±0.00 N/A N/A
ENST00000496437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.187±0.05 N/A
ENSG00000265239 ENST00000580337 N/A 1.043±0.00 N/A 0.552±0.00 N/A N/A N/A 0.263±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000271670 ENST00000605549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.299±0.00 N/A N/A N/A
ENSG00000274461 ENST00000613658 N/A N/A 0.164±0.00 0.147±0.00 0.077±0.00 N/A 0.015±0.00 N/A 0.104±0.00 N/A N/A 0.201±0.17 N/A N/A
ENST00000617518 0.132±0.00 0.304±0.00 N/A 0.378±0.13 0.293±0.00 0.173±0.00 0.031±0.00 N/A 0.110±0.00 0.346±0.00 N/A 0.183±0.00 N/A N/A
ENST00000618591 0.047±0.00 0.287±0.00 0.122±0.00 0.146±0.10 0.269±0.18 N/A 0.044±0.00 N/A 0.054±0.00 0.035±0.00 N/A 0.144±0.10 N/A 1.015±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042055 ENSMUST00000084519 7.624±1.56 4.449±1.98 5.185±0.12 5.945±2.29 4.109±1.05 6.469±1.29 3.159±0.74 7.358±0.57 4.368±0.81 8.262±1.92 5.779±0.43 6.248±2.86 6.024±2.24 9.730±1.02
ENSMUST00000136560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.093±1.05 N/A N/A
ENSMUST00000136734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.273±0.07 N/A N/A
ENSMUST00000140877 3.050±0.13 4.498±1.79 5.498±0.68 5.277±0.55 3.006±0.68 3.470±0.86 1.666±0.41 3.290±0.41 2.881±0.29 4.733±0.96 1.998±0.32 5.540±1.45 4.233±0.53 3.267±0.00
ENSMUST00000143422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148752 N/A N/A N/A 1.936±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149541 2.330±0.00 N/A 0.981±0.03 N/A 0.885±0.00 1.548±0.00 N/A N/A 0.688±0.02 1.672±0.00 N/A 2.261±0.00 1.017±0.00 N/A
ENSMUSG00000070366 ENSMUST00000094018 0.077±0.04 0.065±0.00 0.705±0.09 2.415±1.47 0.147±0.12 0.158±0.09 0.050±0.01 0.157±0.05 0.041±0.04 0.035±0.00 0.051±0.00 0.206±0.15 0.045±0.00 1.932±0.45

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