C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Kv channel interacting protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000120049 KCNIP2 9606 - 10:101825974-101843920 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000239117 KCNIP2-002 101827641-101843568 protein_coding
  ENST00000343195 KCNIP2-014 101827353-101843568 protein_coding
  ENST00000348850 KCNIP2-010 101825974-101839872 protein_coding
  ENST00000353068 KCNIP2-001 101827353-101843568 protein_coding
  ENST00000355657 KCNIP2-011 101825974-101843920 processed_transcript
  ENST00000356640 KCNIP2-009 101826453-101843844 protein_coding
  ENST00000358038 KCNIP2-201 101825975-101843920 protein_coding
  ENST00000370046 KCNIP2-006 101827186-101843769 protein_coding
  ENST00000434163 KCNIP2-003 101827353-101830438 protein_coding
  ENST00000460388 KCNIP2-008 101826973-101827955 processed_transcript
  ENST00000461105 KCNIP2-013 101827353-101843568 protein_coding
  ENST00000472764 KCNIP2-004 101827296-101843568 processed_transcript
  ENST00000483385 KCNIP2-007 101828267-101829547 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000343195ENST00000348850ENST00000355657ENST00000356640ENST00000358038ENST00000370046ENST00000434163ENST00000460388ENST00000472764ENST00000483385
Transcript ID Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000343195 N/A N/A 0.506±0.00 N/A 0.423±0.00 N/A N/A 0.584±0.21 N/A
ENST00000348850 3.872±0.00 53.456±0.00 0.521±0.00 1.196±0.00 0.581±0.00 N/A 0.521±0.25 0.368±0.00 1.492±0.00
ENST00000355657 N/A N/A N/A N/A N/A N/A N/A 0.125±0.00 N/A
ENST00000356640 N/A N/A N/A N/A N/A N/A N/A 0.262±0.00 N/A
ENST00000358038 2.977±0.00 56.651±0.00 N/A 25.191±24.19 N/A N/A 0.408±0.00 0.349±0.00 N/A
ENST00000370046 N/A N/A N/A N/A 0.380±0.00 N/A N/A N/A N/A
ENST00000434163 N/A N/A N/A N/A N/A N/A N/A N/A 2.730±0.00
ENST00000460388 N/A N/A 0.616±0.00 N/A 0.233±0.00 N/A 0.863±0.00 N/A N/A
ENST00000472764 N/A N/A N/A N/A N/A 2.321±0.00 N/A N/A N/A
ENST00000483385 N/A N/A N/A N/A N/A N/A 0.944±0.30 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099F CIL_00099F_0001 VISTA 10:101467436-102068636
CIL_00099E CIL_00099E_0001 VISTA 10:101480423-102081273
CIL_0005NM CIL_0005NM_0001 CGP 10:101784443-101843920
CIL_00007M CIL_00007M_0002 CGP 10:101825974-102056193

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005250 TAS A-type (transient outward) potassium channel activity
GO:0005509 TAS:IEA calcium ion binding
GO:0005513 TAS detection of calcium ion
GO:0005515 IPI protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005737 IDA cytoplasm
GO:0006813 TAS potassium ion transport
GO:0006936 NAS muscle contraction
GO:0007165 TAS signal transduction
GO:0007268 NAS synaptic transmission
GO:0008016 TAS regulation of heart contraction
GO:0008076 NAS voltage-gated potassium channel complex
GO:0015459 IDA potassium channel regulator activity
GO:0042802 IPI identical protein binding
GO:0044325 IPI ion channel binding
GO:0045163 IDA clustering of voltage-gated potassium channels
GO:0046923 NAS ER retention sequence binding
GO:0047485 IPI protein N-terminus binding
GO:0071435 IDA potassium ion export
GO:0071805 IDA potassium ion transmembrane transport
GO:0086009 IDA membrane repolarization
GO:2001257 TAS regulation of cation channel activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043993 KCNIP2 (1 of 2) Kv channel interacting protein 2 protein_coding Danio_rerio
ENSDARG00000075846 kcnip2 Kv channel interacting protein 2 protein_coding Danio_rerio
ENSMUSG00000025221 Kcnip2 Kv channel-interacting protein 2 protein_coding Mus_musculus

Loading