C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Kv channel interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356640 KCNIP2-009 ENSG00000120049 9606 - 10:101826453-101843844 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000356640
Transcript ID Placenta
ENST00000356640 0.262±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099F CIL_00099F_0001 VISTA 10:101467436-102068636
CIL_00099E CIL_00099E_0001 VISTA 10:101480423-102081273
CIL_0005NM CIL_0005NM_0001 CGP 10:101784443-101843920
CIL_00007M CIL_00007M_0002 CGP 10:101825974-102056193

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005250 TAS A-type (transient outward) potassium channel activity
GO:0005509 TAS:IEA calcium ion binding
GO:0005513 TAS detection of calcium ion
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0006813 TAS potassium ion transport
GO:0006936 NAS muscle contraction
GO:0007165 TAS signal transduction
GO:0007268 NAS synaptic transmission
GO:0008016 TAS regulation of heart contraction
GO:0008076 NAS voltage-gated potassium channel complex
GO:0015459 IDA potassium channel regulator activity
GO:0042802 IPI identical protein binding
GO:0044325 IPI ion channel binding
GO:0045163 IDA clustering of voltage-gated potassium channels
GO:0046923 NAS ER retention sequence binding
GO:0047485 IPI protein N-terminus binding
GO:0071435 IDA potassium ion export
GO:0071805 IDA potassium ion transmembrane transport
GO:0086009 IDA membrane repolarization
GO:2001257 TAS regulation of cation channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162528 Kcnip2-003 protein_coding Mus_musculus 0 1589
ENSMUST00000111906 Kcnip2-004 retained_intron Mus_musculus 0 1194
ENSMUST00000079431 Kcnip2-201 protein_coding Mus_musculus 0 1105
ENSMUST00000086993 Kcnip2-002 protein_coding Mus_musculus 0 963
ENSMUST00000026247 Kcnip2-001 protein_coding Mus_musculus 0 948
ENSMUST00000161886 Kcnip2-005 protein_coding Mus_musculus 0 821
ENSMUST00000159245 Kcnip2-006 protein_coding Mus_musculus 0 472
ENSMUST00000162661 Kcnip2-007 protein_coding Mus_musculus 0 359
ENSMUST00000159446 Kcnip2-008 protein_coding Mus_musculus 0 326
ENSMUST00000159210 Kcnip2-009 protein_coding Mus_musculus 0 265

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