C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 117, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000121104 FAM117A 9606 - 17:49710332-49789180 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000240364 FAM117A-001 49710332-49764167 protein_coding
  ENST00000503573 FAM117A-013 49711345-49719894 nonsense_mediated_decay
  ENST00000503720 FAM117A-007 49720404-49788575 processed_transcript
  ENST00000503855 FAM117A-006 49717557-49788578 processed_transcript
  ENST00000505159 FAM117A-003 49717606-49789180 processed_transcript
  ENST00000506156 FAM117A-009 49717657-49764131 protein_coding
  ENST00000509347 FAM117A-004 49720332-49789165 processed_transcript
  ENST00000511743 FAM117A-012 49716205-49724527 protein_coding
  ENST00000513602 FAM117A-002 49710995-49788592 protein_coding
  ENST00000514018 FAM117A-005 49717587-49788989 processed_transcript
  ENST00000514841 FAM117A-011 49722507-49732942 retained_intron
  ENST00000515240 FAM117A-010 49717686-49747263 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeHeartKidneyLiverOvaryPlacentaENST00000240364
Transcript ID Adipose Heart Kidney Liver Ovary Placenta
ENST00000240364 4.269±0.00 4.475±0.00 1.672±0.00 1.335±0.00 12.983±3.42 5.827±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000877 CIL_000877_0001 VISTA 17:49438854-50041456
CIL_0009BV CIL_0009BV_0001 VISTA 17:49438877-50041441
CIL_0007QJ CIL_0007QJ_0001 VISTA 17:49459872-50061823
CIL_0004N1 CIL_0004N1_0002 CGP 17:49700943-49789180

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078640 FAM117A (1 of 2) family with sequence similarity 117, member A protein_coding Danio_rerio
ENSDARG00000079252 FAM117A (2 of 2) family with sequence similarity 117, member A protein_coding Danio_rerio
ENSMUSG00000038893 Fam117a family with sequence similarity 117, member A protein_coding Mus_musculus

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