C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 117, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038893 Fam117a 10090 + 11:95337018-95381872 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037502 Fam117a-001 95337018-95381872 protein_coding
  ENSMUST00000129290 Fam117a-004 95339933-95364021 processed_transcript
  ENSMUST00000129553 Fam117a-002 95339931-95375632 processed_transcript
  ENSMUST00000132357 Fam117a-006 95337020-95375083 processed_transcript
  ENSMUST00000143482 Fam117a-003 95339962-95375087 processed_transcript
  ENSMUST00000155999 Fam117a-005 95375467-95377585 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037502ENSMUST00000132357
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037502 4.720±0.90 7.671±2.20 8.426±1.00 2.429±0.91 14.130±7.28 5.256±1.46 1.541±0.73 2.599±0.18 35.315±38.49 11.335±5.84 0.587±0.29 8.417±3.33 10.988±7.42 3.478±2.21
ENSMUST00000132357 N/A N/A N/A N/A N/A 5.094±0.00 N/A N/A N/A N/A N/A 9.514±0.00 23.755±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QJ CIL_0007QJ_0002 VISTA 11:95039208-95641127
CIL_000877 CIL_000877_0002 VISTA 11:95055809-95658196
CIL_0009BV CIL_0009BV_0002 VISTA 11:95055825-95658170

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078640 FAM117A (1 of 2) family with sequence similarity 117, member A protein_coding Danio_rerio
ENSDARG00000079252 FAM117A (2 of 2) family with sequence similarity 117, member A protein_coding Danio_rerio
ENSG00000121104 FAM117A family with sequence similarity 117, member A protein_coding Homo_sapiens

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