C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, MYM-type 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000121741 ZMYM2 9606 + 13:19958670-20091829 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000382870 ZMYM2-001 20026519-20086747 retained_intron
  ENST00000382871 ZMYM2-005 19958783-20086746 protein_coding
  ENST00000382874 ZMYM2-003 19958708-20091829 protein_coding
  ENST00000382881 ZMYM2-004 19958677-20019963 retained_intron
  ENST00000382883 ZMYM2-009 20024394-20086691 retained_intron
  ENST00000468677 ZMYM2-006 20025307-20031379 processed_transcript
  ENST00000490152 ZMYM2-008 20066979-20068349 processed_transcript
  ENST00000490422 ZMYM2-002 20083010-20086011 processed_transcript
  ENST00000494061 ZMYM2-007 20066578-20083757 retained_intron
  ENST00000610343 ZMYM2-201 19958670-20091829 protein_coding
  ENST00000610795 ZMYM2-202 19958670-20091829 protein_coding
  ENST00000620447 ZMYM2-010 19959859-20003092 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000382870ENST00000382871ENST00000382883ENST00000494061ENST00000610795
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000382870 N/A 3.413±0.00 N/A 3.297±0.00 3.659±0.00 1.566±0.00 N/A 3.945±0.00 0.943±0.00 N/A 1.359±0.00 9.723±9.01 2.969±1.98 18.060±10.78
ENST00000382871 3.869±0.00 4.987±0.00 2.065±0.00 6.410±1.50 6.690±1.24 3.539±1.27 3.608±1.31 2.427±0.70 2.192±0.85 5.346±1.64 1.412±0.38 4.361±0.64 1.436±0.07 16.017±4.00
ENST00000382883 1.370±0.00 1.305±0.00 1.689±0.00 N/A N/A N/A N/A N/A 3.185±0.00 1.074±0.00 N/A N/A N/A N/A
ENST00000494061 N/A N/A 5.213±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610795 N/A N/A 1.127±0.00 1.701±0.23 N/A 1.116±0.00 N/A N/A N/A N/A 0.680±0.00 1.967±0.92 0.565±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SJ CIL_0003SJ_0001 CGP 13:19823482-20091829

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0008270 NAS:IEA zinc ion binding
GO:0016605 IDA PML body
GO:0031624 IPI ubiquitin conjugating enzyme binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027353 zmym2 zinc finger, MYM-type 2 protein_coding Danio_rerio
ENSMUSG00000021945 Zmym2 zinc finger, MYM-type 2 protein_coding Mus_musculus

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