C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, MYM-type 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382871 ZMYM2-005 ENSG00000121741 9606 + 13:19958783-20086746 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000382871
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000382871 3.869±0.00 4.987±0.00 2.065±0.00 6.410±1.50 6.690±1.24 3.539±1.27 3.608±1.31 2.427±0.70 2.192±0.85 5.346±1.64 1.412±0.38 4.361±0.64 1.436±0.07 16.017±4.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SJ CIL_0003SJ_0001 CGP 13:19823482-20091829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0008270 NAS:IEA zinc ion binding
GO:0016605 IDA PML body
GO:0031624 IPI ubiquitin conjugating enzyme binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022511 Zmym2-201 protein_coding Mus_musculus 0 6739
ENSMUST00000039812 Zmym5-201 protein_coding Mus_musculus 0 551
ENSMUST00000111285 Zmym5-202 protein_coding Mus_musculus 0 551
ENSMUST00000173954 Zmym5-001 protein_coding Mus_musculus 0 551
ENSMUST00000124359 Gm2869-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000118676 Gm15303-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000117779 Gm15302-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000120740 Gm15314-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000121457 Gm7869-001 processed_pseudogene Mus_musculus 0 405

Loading