C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gap junction protein, beta 6, 30kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000121742 GJB6 9606 - 13:20221971-20232395 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000241124 GJB6-001 20221971-20230978 protein_coding
  ENST00000356192 GJB6-004 20221971-20232395 protein_coding
  ENST00000400065 GJB6-002 20221971-20232303 protein_coding
  ENST00000400066 GJB6-003 20221971-20232301 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000241124ENST00000356192ENST00000400065ENST00000400066
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000241124 N/A 0.012±0.00 18.514±0.27 N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A
ENST00000356192 N/A N/A N/A N/A N/A N/A N/A N/A 2.474±2.23 N/A 0.131±0.00
ENST00000400065 0.035±0.00 0.020±0.00 N/A 0.026±0.00 0.057±0.00 0.047±0.01 0.662±0.00 N/A 1.387±0.76 0.029±0.00 0.416±0.05
ENST00000400066 N/A N/A N/A N/A N/A N/A N/A 0.157±0.00 3.710±3.08 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SL CIL_0003SL_0001 CGP 13:20221971-20525857

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005829 IEA cytosol
GO:0005921 IEA gap junction
GO:0005922 IEA connexon complex
GO:0006915 IEA apoptotic process
GO:0007154 IEA cell communication
GO:0007568 IEA aging
GO:0007605 IEA sensory perception of sound
GO:0008285 IEA negative regulation of cell proliferation
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0032496 IEA response to lipopolysaccharide
GO:0042471 IEA ear morphogenesis
GO:0048839 IEA inner ear development
GO:0051602 IEA response to electrical stimulus
GO:0071333 IEA cellular response to glucose stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042707 cx30.3 connexin 30.3 protein_coding Danio_rerio
ENSMUSG00000040055 Gjb6 gap junction protein, beta 6 protein_coding Mus_musculus

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