C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gap junction protein, beta 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040055 Gjb6 10090 - 14:57123303-57133611 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039380 Gjb6-001 57123303-57133611 protein_coding
  ENSMUST00000160703 Gjb6-002 57124282-57133281 protein_coding
  ENSMUST00000162931 Gjb6-003 57130837-57132059 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039380ENSMUST00000160703ENSMUST00000162931
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039380 0.549±0.01 N/A 17.170±1.29 1.234±0.12 0.042±0.02 N/A 0.015±0.00 0.305±0.01 0.020±0.02 2.904±0.20 0.050±0.03 0.088±0.00 0.260±0.11 0.077±0.06
ENSMUST00000160703 N/A 0.167±0.07 N/A N/A 0.051±0.03 0.059±0.00 N/A 1.523±0.38 0.043±0.05 1.654±0.29 N/A 0.265±0.17 0.103±0.02 0.127±0.06
ENSMUST00000162931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.410±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SL CIL_0003SL_0002 CGP 14:57123303-57398483

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005829 IEA cytosol
GO:0005921 IDA gap junction
GO:0005922 IEA connexon complex
GO:0006915 IEA apoptotic process
GO:0007154 IEA cell communication
GO:0007568 IEA aging
GO:0007605 IMP sensory perception of sound
GO:0008285 IEA negative regulation of cell proliferation
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0032496 IEA response to lipopolysaccharide
GO:0042471 IMP ear morphogenesis
GO:0048839 IEA inner ear development
GO:0051602 IEA response to electrical stimulus
GO:0071333 IEA cellular response to glucose stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042707 cx30.3 connexin 30.3 protein_coding Danio_rerio
ENSG00000121742 GJB6 gap junction protein, beta 6, 30kDa protein_coding Homo_sapiens

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