C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chloride channel CLIC-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000121940 CLCC1 9606 - 1:108929508-108963457 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302500 CLCC1-005 108934658-108950448 protein_coding
  ENST00000348264 CLCC1-004 108934658-108950448 protein_coding
  ENST00000356970 CLCC1-001 108929508-108963457 protein_coding
  ENST00000369968 CLCC1-201 108929508-108950448 protein_coding
  ENST00000369969 CLCC1-202 108929508-108950448 protein_coding
  ENST00000369970 CLCC1-003 108931986-108950448 protein_coding
  ENST00000369976 CLCC1-002 108929939-108963450 protein_coding
  ENST00000473062 CLCC1-007 108929939-108943527 processed_transcript
  ENST00000482889 CLCC1-006 108929980-108943882 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302500ENST00000356970ENST00000369969ENST00000369970ENST00000369976
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302500 N/A N/A 4.054±0.00 N/A 6.923±0.00 4.181±0.00 2.628±0.33 7.578±0.00 4.491±0.00 4.580±0.00 3.827±0.55 N/A N/A N/A
ENST00000356970 3.757±0.00 2.124±0.00 0.624±0.00 6.793±0.12 5.018±0.72 3.903±0.55 0.777±0.01 1.760±0.54 2.465±0.90 3.864±1.24 2.802±0.48 2.541±1.15 5.291±2.88 5.392±0.02
ENST00000369969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.355±0.05 N/A N/A
ENST00000369970 N/A N/A N/A N/A N/A N/A 1.729±0.61 2.889±0.00 2.573±0.68 N/A 4.389±0.00 4.065±0.00 5.873±1.14 N/A
ENST00000369976 N/A 1.849±0.00 N/A N/A N/A N/A 1.070±0.05 N/A 1.954±0.91 N/A 2.144±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005254 IEA chloride channel activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006821 IEA chloride transport
GO:0016020 IDA membrane
GO:0034707 IEA chloride channel complex
GO:0043231 IDA intracellular membrane-bounded organelle
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086174 CLCC1 chloride channel CLIC-like 1 protein_coding Danio_rerio
ENSMUSG00000027884 Clcc1 chloride channel CLIC-like 1 protein_coding Mus_musculus

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