C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lymphocyte antigen 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122224 LY9 9606 + 1:160796074-160828261 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263285 LY9-001 160796158-160828261 protein_coding
  ENST00000368035 LY9-004 160814523-160828255 protein_coding
  ENST00000368037 LY9-003 160796074-160828261 protein_coding
  ENST00000368039 LY9-005 160796187-160802698 protein_coding
  ENST00000392203 LY9-002 160796112-160828255 protein_coding
  ENST00000471816 LY9-009 160796208-160814643 processed_transcript
  ENST00000474998 LY9-008 160796106-160800227 nonsense_mediated_decay
  ENST00000479663 LY9-006 160809749-160815339 retained_intron
  ENST00000480837 LY9-010 160796199-160813830 processed_transcript
  ENST00000485624 LY9-012 160796211-160799664 processed_transcript
  ENST00000490902 LY9-011 160796200-160801965 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263285ENST00000368035ENST00000368037ENST00000368039ENST00000392203ENST00000471816ENST00000474998ENST00000479663ENST00000480837ENST00000485624ENST00000490902
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263285 N/A N/A N/A N/A 0.347±0.00 N/A N/A N/A N/A N/A N/A 0.153±0.00 0.096±0.00 N/A
ENST00000368035 0.056±0.00 N/A N/A N/A 0.184±0.00 0.169±0.06 N/A 0.156±0.00 0.191±0.00 1.326±0.00 N/A 0.106±0.00 0.081±0.00 0.031±0.00
ENST00000368037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.275±0.00 N/A N/A
ENST00000368039 0.224±0.00 4.547±0.00 N/A N/A N/A 0.146±0.00 N/A N/A 0.218±0.16 2.978±0.00 N/A 0.151±0.03 0.218±0.00 N/A
ENST00000392203 N/A 3.247±0.00 0.093±0.00 N/A 0.237±0.00 0.340±0.00 0.028±0.00 N/A N/A N/A N/A 0.053±0.01 N/A N/A
ENST00000471816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.05 N/A
ENST00000474998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A
ENST00000479663 0.055±0.00 N/A N/A 0.036±0.00 0.058±0.00 0.044±0.00 0.032±0.01 0.056±0.00 0.020±0.00 0.615±0.00 0.036±0.00 0.035±0.02 N/A 0.029±0.02
ENST00000480837 N/A N/A N/A N/A N/A N/A N/A 0.138±0.00 N/A N/A N/A 0.213±0.01 N/A N/A
ENST00000485624 N/A N/A N/A 0.272±0.00 N/A N/A N/A N/A 0.318±0.00 2.582±0.00 N/A 0.314±0.00 N/A 0.079±0.00
ENST00000490902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.080±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0007155 IEA cell adhesion
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000004707 Ly9 lymphocyte antigen 9 protein_coding Mus_musculus

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