C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hydrogen voltage-gated channel 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122986 HVCN1 9606 - 12:110627841-110704950 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000242607 HVCN1-003 110648779-110689157 protein_coding
  ENST00000356742 HVCN1-001 110648797-110688709 protein_coding
  ENST00000439744 HVCN1-004 110649133-110689778 protein_coding
  ENST00000546425 HVCN1-005 110682655-110689819 retained_intron
  ENST00000546713 HVCN1-006 110661235-110704950 protein_coding
  ENST00000547887 HVCN1-008 110651325-110683267 nonsense_mediated_decay
  ENST00000548312 HVCN1-002 110627841-110689417 protein_coding
  ENST00000549442 HVCN1-007 110651218-110689809 protein_coding
  ENST00000620084 HVCN1-201 110648686-110683267 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000242607ENST00000439744ENST00000547887ENST00000549442ENST00000620084
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000242607 2.605±0.00 22.902±0.00 N/A 4.810±3.23 4.746±0.00 2.319±0.00 7.188±0.00 1.299±0.00 N/A 4.468±0.00 7.888±0.63 5.409±2.12 36.726±12.16
ENST00000439744 3.004±0.00 N/A N/A N/A 0.923±0.00 N/A N/A N/A N/A 0.361±0.00 N/A N/A N/A
ENST00000547887 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.582±0.00 N/A N/A N/A
ENST00000549442 N/A N/A N/A N/A N/A N/A 1.412±0.00 N/A N/A N/A 1.463±0.00 N/A N/A
ENST00000620084 N/A 10.358±0.00 1.155±0.00 N/A 0.831±0.00 N/A N/A 0.909±0.00 2.445±0.00 N/A N/A N/A 10.984±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006811 IEA ion transport
GO:0007338 TAS single fertilization
GO:0009268 ISS response to pH
GO:0010043 IDA response to zinc ion
GO:0015992 ISS proton transport
GO:0016020 IEA membrane
GO:0016021 IEA:IDA integral component of membrane
GO:0022843 TAS voltage-gated cation channel activity
GO:0030171 IDA voltage-gated proton channel activity
GO:0032504 TAS multicellular organism reproduction
GO:0034220 IEA ion transmembrane transport
GO:0034765 IEA regulation of ion transmembrane transport
GO:0035036 TAS sperm-egg recognition
GO:0055085 IEA transmembrane transport
GO:0071294 IDA cellular response to zinc ion
GO:0071467 IDA cellular response to pH

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040338 hvcn1 hydrogen voltage-gated channel 1 protein_coding Danio_rerio
ENSMUSG00000064267 Hvcn1 hydrogen voltage-gated channel 1 protein_coding Mus_musculus

Loading