C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydrogen voltage-gated channel 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000242607 HVCN1-003 ENSG00000122986 9606 - 12:110648779-110689157 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000242607
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000242607 2.605±0.00 22.902±0.00 4.810±3.23 4.746±0.00 2.319±0.00 7.188±0.00 1.299±0.00 4.468±0.00 7.888±0.63 5.409±2.12 36.726±12.16

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006811 IEA ion transport
GO:0007338 TAS single fertilization
GO:0009268 ISS response to pH
GO:0010043 IDA response to zinc ion
GO:0015992 ISS proton transport
GO:0016020 IEA membrane
GO:0016021 IEA:IDA integral component of membrane
GO:0022843 TAS voltage-gated cation channel activity
GO:0030171 IDA voltage-gated proton channel activity
GO:0032504 TAS multicellular organism reproduction
GO:0034220 IEA ion transmembrane transport
GO:0034765 IEA regulation of ion transmembrane transport
GO:0035036 TAS sperm-egg recognition
GO:0055085 IEA transmembrane transport
GO:0071294 IDA cellular response to zinc ion
GO:0071467 IDA cellular response to pH

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100747 Hvcn1-002 protein_coding Mus_musculus 0 584
ENSMUST00000072602 Hvcn1-001 protein_coding Mus_musculus 0 584
ENSMUST00000143560 Hvcn1-004 protein_coding Mus_musculus 0 318

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