C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: breast carcinoma amplified sequence 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124243 BCAS4 9606 + 20:50794894-50882676 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358791 BCAS4-001 50794894-50877177 protein_coding
  ENST00000371608 BCAS4-002 50794994-50882676 protein_coding
  ENST00000445038 BCAS4-003 50795070-50876572 protein_coding
  ENST00000463943 BCAS4-005 50795071-50877177 nonsense_mediated_decay
  ENST00000485049 BCAS4-004 50795100-50833020 processed_transcript
  ENST00000609336 BCAS4-006 50795031-50876723 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358791ENST00000371608ENST00000463943ENST00000609336
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358791 N/A N/A N/A N/A N/A N/A 2.010±0.00 N/A 0.975±0.00 N/A 1.921±0.00 2.703±0.72 1.269±0.00
ENST00000371608 0.157±0.00 3.808±0.00 3.141±1.14 0.338±0.00 0.758±0.00 0.184±0.13 1.206±0.00 0.418±0.29 0.404±0.00 0.092±0.00 0.422±0.12 0.329±0.04 0.630±0.25
ENST00000463943 0.938±0.00 4.134±0.00 N/A 1.080±0.00 1.014±0.00 0.472±0.00 N/A N/A 1.540±0.00 N/A 1.146±0.40 2.054±1.05 0.995±0.00
ENST00000609336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.240±0.00 1.375±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VZ CIL_0007VZ_0001 VISTA 20:50389770-50992625

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm

Homologs

No Homologs available.

Loading