C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: breast carcinoma amplified sequence 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463943 BCAS4-005 ENSG00000124243 9606 + 20:50795071-50877177 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLungOvaryPlacentaTestisENST00000463943
Transcript ID Adipose Adrenal Breast Colon Heart Lung Ovary Placenta Testis
ENST00000463943 0.938±0.00 4.134±0.00 1.080±0.00 1.014±0.00 0.472±0.00 1.540±0.00 1.146±0.40 2.054±1.05 0.995±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VZ CIL_0007VZ_0001 VISTA 20:50389770-50992625

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112172 Tmsb4x-001 protein_coding Mus_musculus 0 342
ENSMUST00000112175 Tmsb4x-003 protein_coding Mus_musculus 0 326
ENSMUST00000112176 Tmsb4x-002 protein_coding Mus_musculus 0 326

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