C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: t-complex 11, testis-specific
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124678 TCP11 9606 - 6:35118071-35148610 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000244645 TCP11-201 35118077-35141410 protein_coding
  ENST00000311875 TCP11-009 35118072-35141647 protein_coding
  ENST00000373974 TCP11-008 35118135-35141371 protein_coding
  ENST00000373979 TCP11-001 35118071-35141336 protein_coding
  ENST00000394696 TCP11-020 35128705-35141313 processed_transcript
  ENST00000412155 TCP11-004 35118071-35141323 protein_coding
  ENST00000418521 TCP11-015 35118269-35148610 protein_coding
  ENST00000427376 TCP11-006 35119240-35141353 nonsense_mediated_decay
  ENST00000444780 TCP11-005 35118074-35141339 protein_coding
  ENST00000445851 TCP11-022 35128358-35141313 processed_transcript
  ENST00000455706 TCP11-003 35118072-35141349 nonsense_mediated_decay
  ENST00000469514 TCP11-007 35120429-35141339 nonsense_mediated_decay
  ENST00000479418 TCP11-002 35122286-35141264 nonsense_mediated_decay
  ENST00000486638 TCP11-010 35120186-35141310 protein_coding
  ENST00000492680 TCP11-016 35122199-35141353 protein_coding
  ENST00000502480 TCP11-027 35118072-35121045 protein_coding
  ENST00000503195 TCP11-026 35136127-35141027 nonsense_mediated_decay
  ENST00000503908 TCP11-023 35129115-35141311 nonsense_mediated_decay
  ENST00000504758 TCP11-013 35118072-35141253 nonsense_mediated_decay
  ENST00000505335 TCP11-019 35122309-35141316 nonsense_mediated_decay
  ENST00000505400 TCP11-018 35122297-35141313 protein_coding
  ENST00000505911 TCP11-012 35118072-35141264 nonsense_mediated_decay
  ENST00000507706 TCP11-017 35122252-35141336 protein_coding
  ENST00000509988 TCP11-025 35122305-35141311 nonsense_mediated_decay
  ENST00000510465 TCP11-021 35128689-35141313 processed_transcript
  ENST00000512012 TCP11-014 35118269-35141027 protein_coding
  ENST00000514751 TCP11-024 35137746-35141311 nonsense_mediated_decay
  ENST00000611141 TCP11-202 35118077-35141410 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000373974ENST00000412155ENST00000418521ENST00000427376ENST00000444780ENST00000445851ENST00000469514ENST00000486638ENST00000492680ENST00000502480ENST00000504758ENST00000510465ENST00000512012
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000373974 0.052±0.00 N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A 93.376±0.00
ENST00000412155 N/A N/A 0.300±0.00 N/A N/A N/A N/A N/A 0.304±0.00 N/A 40.184±0.00
ENST00000418521 N/A N/A 0.057±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427376 N/A N/A N/A N/A N/A N/A 0.053±0.00 N/A 0.065±0.00 N/A 108.403±0.00
ENST00000444780 0.032±0.00 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 84.246±0.00
ENST00000445851 N/A N/A N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A N/A
ENST00000469514 N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486638 N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A N/A 0.080±0.00 131.967±0.00
ENST00000492680 N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A
ENST00000502480 0.266±0.00 0.244±0.00 0.126±0.00 N/A N/A N/A N/A 0.300±0.00 0.193±0.00 0.131±0.06 161.438±0.00
ENST00000504758 N/A N/A N/A N/A N/A 0.167±0.00 N/A N/A N/A N/A N/A
ENST00000510465 N/A N/A N/A N/A N/A N/A N/A 0.365±0.00 N/A N/A N/A
ENST00000512012 N/A N/A N/A N/A 0.039±0.00 N/A N/A 0.154±0.00 0.224±0.00 N/A 30.605±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EU CIL_0002EU_0001 CGP 6:34889265-35148610
CIL_0002ET CIL_0002ET_0001 CGP 6:35118071-35253079

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007275 TAS multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000062859 Tcp11 t-complex protein 11 protein_coding Mus_musculus

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