C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: persephin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125650 PSPN 9606 - 19:6375148-6379058 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000245810 PSPN-001 6375294-6375849 protein_coding
  ENST00000597721 PSPN-002 6375148-6379058 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLungMuscleOvaryPlacentaENST00000597721
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Lung Muscle Ovary Placenta
ENST00000597721 0.548±0.00 1.002±0.00 0.111±0.00 1.201±0.00 0.578±0.46 0.308±0.00 0.757±0.00 0.475±0.00 0.725±0.12 0.740±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OH CIL_0005OH_0001 CGP 19:6361452-6375251
CIL_0005OG CIL_0005OG_0001 CGP 19:6372433-6379058
CIL_0003WG CIL_0003WG_0001 CGP 19:6375148-6393981

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001658 IEA branching involved in ureteric bud morphogenesis
GO:0005102 TAS receptor binding
GO:0005615 IEA extracellular space
GO:0007399 TAS nervous system development
GO:0007411 TAS axon guidance
GO:0007417 TAS central nervous system development
GO:0008083 IEA growth factor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000002664 Pspn persephin protein_coding Mus_musculus

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