C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003WG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125650-ENSG00000125651 CGP 9606 19:6375148-6393981
GeneTranscriptPositionBiotype
ENSG00000125651 (GTF2F1)
general transcription factor IIF, polypeptide 1, 74kDa
ENST00000394456 (GTF2F1-001) 6379569-6393460 protein_coding
ENST00000593678 (GTF2F1-006) 6379878-6391952 protein_coding
ENST00000594213 (GTF2F1-008) 6380190-6381820 retained_intron
ENST00000594965 (GTF2F1-007) 6380391-6381775 retained_intron
ENST00000595047 (GTF2F1-005) 6381413-6393205 protein_coding
ENST00000598607 (GTF2F1-003) 6387505-6393981 protein_coding
ENSG00000125652 (ALKBH7)
alkB, alkylation repair homolog 7 (E. coli)
ENST00000245812 (ALKBH7-001) 6372433-6375251 protein_coding
ENST00000596657 (ALKBH7-002) 6373471-6375027 protein_coding
ENST00000599849 (ALKBH7-003) 6373704-6375031 protein_coding
ENSG00000214347 (CTB-180A7.8)
ENST00000593563 (CTB-180A7.8-002) 6393809-6411777 lincRNA
ENST00000596254 (CTB-180A7.8-001) 6396345-6412404 lincRNA
ENSG00000269444 (CTB-180A7.6)
ENST00000599584 (CTB-180A7.6-001) 6386762-6390400 sense_overlapping
CIL_0003WG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002664-ENSMUSG00000002658 CGP 10090 17:56999457-57011288
GeneTranscriptPositionBiotype
ENSMUSG00000002658 (Gtf2f1)
general transcription factor IIF, polypeptide 1
ENSMUST00000002733 (Gtf2f1-201) 57003405-57011288 protein_coding
ENSMUSG00000002664 (Pspn)
persephin
ENSMUST00000002740 (Pspn-001) 56999457-57000018 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003WG_0001ENSG00000125651ENST00000394456ENST00000593678ENST00000594213ENST00000594965ENST00000595047ENST00000598607ENSG00000125652ENST00000245812ENST00000596657ENST00000599849ENSG00000214347ENST00000593563ENST00000596254ENSG00000269444ENST00000599584CIL_0003WG_0002ENSMUSG00000002658ENSMUST00000002733ENSMUSG00000002664ENSMUST00000002740
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003WG_0001ENSG00000125651ENST00000394456ENST00000593678ENST00000594965ENST00000595047ENST00000598607ENSG00000125652ENST00000245812ENST00000596657ENST00000599849ENSG00000214347ENST00000593563ENST00000596254ENSG00000269444ENST00000599584CIL_0003WG_0002ENSMUSG00000002658ENSMUST00000002733ENSMUSG00000002664ENSMUST00000002740
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125651 ENST00000394456 6.674±0.00 9.912±0.00 0.314±0.00 6.804±4.98 2.965±2.32 15.088±0.00 2.354±1.63 15.828±0.00 7.614±0.00 8.050±0.00 8.124±0.00 21.055±20.56 19.682±7.06 21.584±4.84
ENST00000593678 6.067±0.00 15.802±0.00 N/A 12.051±9.90 10.504±0.00 14.488±13.97 4.242±0.00 10.270±0.00 6.731±0.00 2.441±2.17 4.611±3.73 29.929±8.02 9.205±3.19 22.429±0.00
ENST00000594213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.396±0.00 8.923±0.00 27.253±0.17
ENST00000595047 N/A N/A 1.407±0.00 7.031±5.18 0.957±0.00 0.761±0.00 N/A N/A N/A 1.754±0.00 2.984±0.00 N/A N/A 11.837±0.00
ENST00000598607 N/A N/A 1.461±0.00 N/A N/A N/A N/A 0.645±0.00 4.171±0.00 1.391±0.00 N/A 2.161±0.00 17.466±0.00 54.719±0.00
ENSG00000125652 ENST00000245812 4.169±0.00 4.219±0.00 1.834±0.00 3.407±0.87 4.454±2.16 3.396±0.00 8.196±4.37 10.148±0.00 5.672±4.36 2.550±2.09 6.053±2.22 4.107±1.82 10.062±1.54 70.755±32.45
ENST00000596657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 62.004±0.00
ENST00000599849 25.937±0.00 25.819±0.00 2.446±0.00 19.095±0.00 40.719±0.00 92.078±0.00 46.959±0.00 59.341±0.00 32.520±30.76 21.597±18.80 17.765±10.62 64.975±0.00 68.377±6.94 201.512±0.00
ENSG00000214347 ENST00000593563 0.372±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.801±0.00
ENST00000596254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.969±0.65
ENSG00000269444 ENST00000599584 0.248±0.00 0.316±0.00 N/A 0.192±0.00 0.290±0.00 0.153±0.00 0.052±0.00 0.168±0.00 N/A N/A N/A 0.170±0.04 0.182±0.00 0.330±0.18
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002658 ENSMUST00000002733 14.063±2.64 18.640±2.04 18.840±0.64 34.844±14.06 13.575±3.86 22.907±1.77 5.949±1.14 11.964±1.80 21.892±17.02 12.914±2.66 7.688±0.53 27.480±9.24 39.707±16.11 123.436±52.78
ENSMUSG00000002664 ENSMUST00000002740 0.453±0.26 2.079±0.76 0.066±0.00 0.515±0.22 0.758±0.40 1.312±0.49 0.190±0.09 0.612±0.26 0.215±0.10 0.533±0.16 0.256±0.07 2.191±0.90 0.294±0.26 0.181±0.01

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