C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor 15 (basic helix-loop-helix)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125878 TCF15 9606 - 20:603797-610398 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000246080 TCF15-001 603797-610398 protein_coding
  ENST00000621005 TCF15-201 604259-610266 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000246080ENST00000621005
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000246080 0.312±0.00 N/A 0.076±0.00 N/A 0.043±0.00 N/A N/A N/A N/A N/A 0.180±0.00 2.418±0.16 N/A
ENST00000621005 4.577±0.00 0.897±0.00 0.061±0.00 2.398±2.25 0.956±0.82 10.340±8.67 0.579±0.00 0.043±0.00 2.606±2.06 3.342±0.80 0.317±0.18 12.424±3.57 6.470±4.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096R CIL_00096R_0001 VISTA 20:23407-624368

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001756 IEA somitogenesis
GO:0003016 IEA respiratory system process
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0007498 TAS mesoderm development
GO:0007517 IEA muscle organ development
GO:0009952 IEA anterior/posterior pattern specification
GO:0010468 IEA regulation of gene expression
GO:0016265 IEA death
GO:0036342 IEA post-anal tail morphogenesis
GO:0042755 IEA eating behavior
GO:0043583 IEA ear development
GO:0043588 IEA skin development
GO:0045198 IEA establishment of epithelial cell apical/basal polarity
GO:0046983 IEA protein dimerization activity
GO:0048339 IEA paraxial mesoderm development
GO:0048644 IEA muscle organ morphogenesis
GO:0048705 IEA skeletal system morphogenesis
GO:0050884 IEA neuromuscular process controlling posture
GO:0060231 IEA mesenchymal to epithelial transition
GO:1903053 IEA regulation of extracellular matrix organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067544 par1 paraxis protein_coding Danio_rerio
ENSMUSG00000068079 Tcf15 transcription factor 15 protein_coding Mus_musculus

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