C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: X-ray repair complementing defective repair in Chinese hamster cells 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000126215 XRCC3 9606 - 14:103697609-103715504 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000352127 XRCC3-001 103697617-103715504 protein_coding
  ENST00000553264 XRCC3-003 103697618-103712104 protein_coding
  ENST00000553332 XRCC3-007 103708572-103715486 protein_coding
  ENST00000553361 XRCC3-011 103706332-103715459 protein_coding
  ENST00000553807 XRCC3-015 103703278-103708826 retained_intron
  ENST00000554170 XRCC3-014 103708579-103714213 protein_coding
  ENST00000554774 XRCC3-016 103698943-103703347 retained_intron
  ENST00000554811 XRCC3-006 103697618-103708855 retained_intron
  ENST00000554913 XRCC3-005 103697609-103715443 protein_coding
  ENST00000554974 XRCC3-012 103698739-103715459 protein_coding
  ENST00000555055 XRCC3-002 103697618-103715469 protein_coding
  ENST00000555231 XRCC3-010 103708429-103715459 retained_intron
  ENST00000555451 XRCC3-017 103700453-103703327 processed_transcript
  ENST00000555832 XRCC3-018 103702016-103703237 processed_transcript
  ENST00000555964 XRCC3-008 103707103-103715484 protein_coding
  ENST00000556682 XRCC3-009 103708530-103715484 protein_coding
  ENST00000556980 XRCC3-013 103707071-103714250 protein_coding
  ENST00000557439 XRCC3-004 103704396-103715483 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020Z CIL_00020Z_0001 CGP 14:103697609-103733668

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000400 IDA four-way junction DNA binding
GO:0000724 IMP double-strand break repair via homologous recombination
GO:0000737 IMP DNA catabolic process, endonucleolytic
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005657 IDA replication fork
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006200 IEA ATP catabolic process
GO:0006259 IEA DNA metabolic process
GO:0006281 IGI DNA repair
GO:0006310 TAS DNA recombination
GO:0006974 TAS cellular response to DNA damage stimulus
GO:0008094 IEA DNA-dependent ATPase activity
GO:0008821 IMP crossover junction endodeoxyribonuclease activity
GO:0010033 IEA response to organic substance
GO:0010824 IMP regulation of centrosome duplication
GO:0033065 IDA Rad51C-XRCC3 complex
GO:0048471 IDA perinuclear region of cytoplasm
GO:0071140 IMP resolution of mitotic recombination intermediates
GO:0090267 IMP positive regulation of mitotic cell cycle spindle assembly checkpoint

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017928 xrcc3 X-ray repair complementing defective repair in Chinese hamster cells 3 protein_coding Danio_rerio
ENSMUSG00000021287 Xrcc3 X-ray repair complementing defective repair in Chinese hamster cells 3 protein_coding Mus_musculus

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