C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: oligodendrocyte myelin glycoprotein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000126861 OMG 9606 - 17:31272013-31297539 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000247271 OMG-001 31294647-31297411 protein_coding
  ENST00000580156 OMG-003 31272449-31297230 processed_transcript
  ENST00000582029 OMG-002 31294575-31297539 retained_intron
  ENST00000584094 OMG-004 31272013-31273622 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000247271ENST00000580156ENST00000582029ENST00000584094
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000247271 N/A 0.182±0.00 0.251±0.00 34.659±0.99 0.451±0.00 0.265±0.00 0.094±0.00 0.100±0.01 0.175±0.15 N/A 0.113±0.00 0.332±0.00 0.053±0.03 0.261±0.20
ENST00000580156 N/A N/A N/A N/A N/A N/A 0.098±0.00 0.818±0.00 0.055±0.00 N/A 0.267±0.00 N/A N/A N/A
ENST00000582029 0.196±0.00 0.194±0.00 0.177±0.00 N/A 0.495±0.00 0.287±0.23 0.068±0.00 0.136±0.00 0.260±0.24 0.404±0.00 0.374±0.00 0.235±0.29 0.021±0.01 0.028±0.00
ENST00000584094 N/A 1.131±0.00 N/A N/A 0.254±0.00 0.403±0.00 0.220±0.13 N/A 1.275±0.00 7.871±6.14 N/A 0.643±0.52 0.164±0.08 0.171±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GN CIL_0004GN_0002 CGP 17:31094927-31382116
CIL_0005JJ CIL_0005JJ_0001 CGP 17:31272013-31314112

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0007155 IEA cell adhesion
GO:0031102 IEA neuron projection regeneration
GO:0031225 IEA anchored component of membrane
GO:0042802 IEA identical protein binding
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0048683 IEA regulation of collateral sprouting of intact axon in response to injury
GO:0050770 TAS regulation of axonogenesis
GO:0050771 TAS negative regulation of axonogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086573 omga oligodendrocyte myelin glycoprotein a protein_coding Danio_rerio
ENSDARG00000089444 ogmb oligodendrocyte myelin glycoprotein b protein_coding Danio_rerio
ENSDARG00000092834 oligodendrocyte myelin glycoprotein protein_coding Danio_rerio
ENSMUSG00000049612 Omg oligodendrocyte myelin glycoprotein protein_coding Mus_musculus

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