C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain 60
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000126870 WDR60 9606 + 7:158856578-158956747 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000397143 WDR60-004 158869446-158871499 protein_coding
  ENST00000407559 WDR60-001 158856578-158946189 protein_coding
  ENST00000444851 WDR60-002 158879780-158946189 nonsense_mediated_decay
  ENST00000454771 WDR60-005 158934193-158956747 nonsense_mediated_decay
  ENST00000467220 WDR60-003 158884574-158946189 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000407559ENST00000444851ENST00000454771ENST00000467220
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000407559 4.065±0.00 3.327±0.00 0.366±0.00 4.445±0.00 3.138±2.48 2.867±0.00 8.812±0.00 3.433±2.95 0.732±0.09 3.984±0.00 4.509±0.00 6.439±2.85 2.405±1.66 45.770±33.95
ENST00000444851 N/A N/A N/A 1.227±0.00 N/A 0.689±0.00 0.496±0.00 0.504±0.00 1.304±0.00 1.185±0.00 0.103±0.00 1.618±0.00 1.062±0.00 N/A
ENST00000454771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.127±0.00 N/A N/A N/A
ENST00000467220 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.496±0.00 0.254±0.00 0.381±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZE CIL_0007ZE_0001 VISTA 7:158795629-159398671

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005929 IEA cilium
GO:0030030 IEA cell projection organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076934 WDR60 WD repeat domain 60 protein_coding Danio_rerio
ENSMUSG00000042050 Wdr60 WD repeat domain 60 protein_coding Mus_musculus

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