C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007ZE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1753 VISTA 9606 7:158795629-159398671
GeneTranscriptPositionBiotype
ENSG00000106018 (VIPR2)
vasoactive intestinal peptide receptor 2 		ENST00000262178 (VIPR2-001) 159028175-159144957 protein_coding
ENST00000377633 (VIPR2-003) 159030455-159097204 protein_coding
ENST00000402066 (VIPR2-002) 159030518-159144859 protein_coding
ENST00000421760 (VIPR2-004) 159116922-159144852 protein_coding
ENSG00000117868 (ESYT2)
extended synaptotagmin-like protein 2 		ENST00000251527 (ESYT2-001) 158730995-158829628 protein_coding
ENST00000275418 (ESYT2-004) 158733611-158829472 protein_coding
ENST00000435514 (ESYT2-005) 158733613-158744217 retained_intron
ENST00000483958 (ESYT2-008) 158773367-158827641 processed_transcript
ENST00000497111 (ESYT2-007) 158793674-158830253 processed_transcript
ENST00000613624 (ESYT2-201) 158734207-158830038 protein_coding
ENSG00000229435 (PIP5K1P2)
phosphatidylinositol-4-phosphate 5-kinase, type I, pseudogene 2 		ENST00000437005 (PIP5K1P2-001) 159231435-159233377 unprocessed_pseudogene
ENSG00000231419 (LINC00689)
long intergenic non-protein coding RNA 689 		ENST00000413238 (LINC00689-003) 159017408-159030195 lincRNA
ENST00000417032 (LINC00689-004) 159006522-159008789 lincRNA
ENST00000438049 (LINC00689-002) 159008421-159026238 antisense
ENST00000447563 (LINC00689-001) 159008354-159022680 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007ZE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1753 VISTA 10090 12:115798480-116400072
GeneTranscriptPositionBiotype
ENSMUSG00000011171 (Vipr2)
vasoactive intestinal peptide receptor 2 		ENSMUST00000011315 (Vipr2-001) 116077728-116146261 protein_coding
ENSMUST00000100988 (Vipr2-005) 116077760-116098382 processed_transcript
ENSMUST00000175785 (Vipr2-002) 116077766-116094756 processed_transcript
ENSMUST00000176078 (Vipr2-003) 116077726-116139972 retained_intron
ENSMUST00000176433 (Vipr2-006) 116137347-116143741 protein_coding
ENSMUST00000177199 (Vipr2-004) 116077773-116133327 processed_transcript
ENSMUSG00000021171 (Esyt2)
extended synaptotagmin-like protein 2 		ENSMUST00000100986 (Esyt2-201) 116281222-116373096 protein_coding
ENSMUSG00000042050 (Wdr60)
WD repeat domain 60 		ENSMUST00000039349 (Wdr60-201) 116207050-116263025 protein_coding
ENSMUSG00000042063 (Zfp386)
zinc finger protein 386 (Kruppel-like) 		ENSMUST00000073551 (Zfp386-001) 116047724-116060592 protein_coding
ENSMUST00000182566 (Zfp386-003) 116047764-116055116 retained_intron
ENSMUST00000182883 (Zfp386-004) 116047829-116051625 retained_intron
ENSMUST00000183125 (Zfp386-002) 116047776-116063360 protein_coding
ENSMUSG00000065685 (Gm23732)
predicted gene, 23732 		ENSMUST00000083751 (Gm23732-201) 116173313-116173419 snRNA
ENSMUSG00000078984 (Gm11027)
predicted gene 11027 		ENSMUST00000090195 (Gm11027-201) 116275386-116275612 protein_coding
ENSMUSG00000093765 (Gm20658)
predicted gene 20658 		ENSMUST00000175871 (Gm20658-002) 116102769-116138521 processed_transcript
ENSMUST00000177059 (Gm20658-001) 116102792-116138648 processed_transcript
ENSMUSG00000093896 (Ighv1-76)
immunoglobulin heavy variable 1-76 		ENSMUST00000169155 (Ighv1-76-201) 115847881-115848174 IG_LV_gene
ENSMUSG00000094075 (Ighv1-80)
immunoglobulin heavy variable 1-80 		ENSMUST00000103547 (Ighv1-80-201) 115912344-115912776 IG_LV_gene
ENSMUSG00000094124 (Gm16710)
predicted gene, 16710 		ENSMUST00000103543 (Gm16710-201) 115802648-115803080 IG_LV_gene
ENSMUSG00000094689 (Ighv1-81)
immunoglobulin heavy variable 1-81 		ENSMUST00000103548 (Ighv1-81-201) 115920279-115920712 IG_LV_gene
ENSMUSG00000094940 (Ighv1-84)
immunoglobulin heavy variable 1-84 		ENSMUST00000103551 (Ighv1-84-201) 115980702-115981134 IG_LV_gene
ENSMUSG00000095127 (Ighv1-82)
immunoglobulin heavy variable 1-82 		ENSMUST00000103549 (Ighv1-82-201) 115952538-115952831 IG_LV_gene
ENSMUSG00000096020 (Ighv1-75)
immunoglobulin heavy variable 1-75 		ENSMUST00000103544 (Ighv1-75-201) 115833950-115834396 IG_LV_gene
ENSMUSG00000096150 (Ighv1-85)
immunoglobulin heavy variable 1-85 		ENSMUST00000103552 (Ighv1-85-201) 116000028-116000461 IG_LV_gene
ENSMUSG00000096326 (Ighv1-78)
immunoglobulin heavy variable 1-78 		ENSMUST00000163670 (Ighv1-78-201) 115868773-115869066 IG_LV_gene
ENSMUSG00000096452 (Ighv1-77)
immunoglobulin heavy variable 1-77 		ENSMUST00000170551 (Ighv1-77-201) 115861867-115862160 IG_LV_gene
ENSMUSG00000096466 (Ighv1-83)
immunoglobulin heavy variable 1-83 		ENSMUST00000103550 (Ighv1-83-201) 115963793-115964196 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007ZE_0001ENSG00000106018ENST00000262178ENST00000377633ENST00000402066ENST00000421760ENSG00000117868ENST00000251527ENST00000275418ENST00000435514ENST00000483958ENST00000497111ENST00000613624ENSG00000229435ENST00000437005ENSG00000231419ENST00000413238ENST00000417032ENST00000438049ENST00000447563CIL_0007ZE_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007ZE_0001ENSG00000106018ENST00000262178ENST00000377633ENST00000402066ENST00000421760ENSG00000117868ENST00000251527ENST00000275418ENST00000613624ENSG00000229435ENST00000437005ENSG00000231419ENST00000413238ENST00000438049ENST00000447563CIL_0007ZE_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106018 ENST00000262178 0.071±0.00 1.427±0.00 N/A 0.948±0.52 0.346±0.06 1.877±1.19 1.878±1.48 0.418±0.00 0.410±0.37 0.258±0.09 0.206±0.00 3.317±2.30 3.676±1.83 1.767±1.03
ENST00000377633 N/A N/A N/A N/A N/A N/A 2.817±0.00 N/A N/A 0.267±0.00 0.235±0.00 0.082±0.00 N/A N/A
ENST00000402066 0.183±0.00 N/A N/A 0.250±0.00 N/A N/A N/A N/A 0.021±0.00 0.182±0.00 0.132±0.00 3.966±0.00 N/A 0.978±0.00
ENST00000421760 N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A 0.637±0.00 N/A N/A
ENSG00000117868 ENST00000251527 18.746±0.00 7.726±0.00 N/A 6.903±3.09 12.478±7.60 10.055±3.48 8.853±4.74 11.540±0.00 6.626±3.37 8.318±2.91 10.913±9.34 7.628±5.25 10.488±5.87 14.783±0.00
ENST00000275418 N/A N/A 2.164±0.00 N/A N/A 7.276±0.00 N/A N/A 9.179±0.00 4.738±0.00 N/A 5.316±0.00 5.483±0.88 10.028±0.00
ENST00000435514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613624 N/A N/A N/A N/A 4.258±0.00 N/A 3.370±0.00 1.459±0.00 N/A 12.637±0.00 3.700±0.00 5.686±1.85 N/A 7.350±0.00
ENSG00000229435 ENST00000437005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.123±0.00 0.041±0.00 0.116±0.00
ENSG00000231419 ENST00000413238 0.044±0.00 N/A N/A N/A 0.045±0.00 N/A N/A 0.070±0.00 N/A 0.055±0.00 0.037±0.00 N/A 0.208±0.00 N/A
ENST00000417032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.206±0.00 0.237±0.00
ENST00000447563 0.057±0.00 N/A 0.051±0.00 N/A 0.043±0.00 N/A N/A N/A N/A 0.106±0.00 0.210±0.00 N/A N/A 0.637±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000011171 ENSMUST00000011315 1.090±0.73 0.200±0.10 0.192±0.01 0.417±0.28 0.264±0.17 2.670±0.41 0.298±0.03 0.109±0.03 0.113±0.05 8.541±0.77 0.211±0.06 0.775±0.34 0.080±0.08 0.063±0.04
ENSMUST00000100988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.354±0.00 N/A
ENSMUST00000175785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176078 N/A 0.160±0.07 N/A N/A 0.035±0.00 N/A N/A 0.053±0.01 N/A N/A N/A 0.201±0.00 0.047±0.00 0.089±0.02
ENSMUST00000176433 N/A N/A N/A N/A 0.600±0.50 N/A N/A 0.290±0.11 N/A N/A N/A 2.902±0.00 N/A 0.080±0.01
ENSMUST00000177199 N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 0.159±0.00 N/A N/A N/A 0.066±0.01 N/A
ENSMUSG00000021171 ENSMUST00000100986 11.259±5.03 11.382±1.66 9.457±2.22 2.178±0.39 6.559±2.01 15.319±3.51 3.159±0.20 4.272±0.67 3.081±1.39 11.350±1.40 0.912±0.22 12.395±3.51 15.170±4.03 2.675±0.73
ENSMUSG00000042050 ENSMUST00000039349 1.830±0.34 1.367±0.54 2.954±0.17 6.228±5.26 1.306±0.42 1.029±0.25 0.229±0.09 1.228±0.52 0.923±0.47 2.381±0.41 1.461±0.34 3.242±1.19 6.956±4.46 16.475±6.48
ENSMUSG00000042063 ENSMUST00000073551 3.310±0.76 1.885±0.66 10.821±0.53 7.045±3.63 2.347±0.68 2.340±0.34 3.215±0.32 1.833±0.64 1.968±0.92 2.176±0.84 7.817±0.75 3.521±3.65 5.767±1.19 2.579±1.36
ENSMUST00000182566 3.283±0.62 N/A N/A N/A 2.416±0.29 2.426±1.06 3.908±0.72 2.040±0.41 1.189±0.25 1.288±0.00 N/A 1.769±0.53 N/A 2.583±0.00
ENSMUST00000182883 0.324±0.00 0.429±0.03 N/A N/A 0.287±0.07 0.288±0.04 N/A 0.224±0.02 0.213±0.08 0.351±0.08 N/A 0.332±0.14 N/A N/A
ENSMUST00000183125 1.355±0.07 0.528±0.00 0.488±0.00 N/A 0.562±0.05 N/A 0.289±0.05 0.344±0.00 0.329±0.02 0.260±0.00 N/A 0.790±0.35 0.468±0.00 0.272±0.00
ENSMUSG00000065685 ENSMUST00000083751 N/A N/A 8.675±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078984 ENSMUST00000090195 16.615±3.67 20.979±12.10 17.775±12.38 27.455±28.42 40.692±10.76 36.327±0.76 9.440±6.14 4.643±1.70 16.443±12.36 22.217±7.08 0.540±0.15 231.673±172.36 4.444±4.98 16.324±3.24
ENSMUSG00000093765 ENSMUST00000175871 0.050±0.02 N/A N/A 0.038±0.03 0.026±0.00 0.095±0.03 N/A N/A 0.022±0.01 0.054±0.03 0.035±0.01 0.070±0.06 N/A 0.020±0.01
ENSMUST00000177059 0.040±0.01 N/A 0.012±0.00 0.014±0.01 0.090±0.06 0.107±0.00 0.018±0.00 N/A 0.029±0.02 0.046±0.01 0.027±0.01 0.068±0.01 0.003±0.00 0.028±0.01
ENSMUSG00000093896 ENSMUST00000169155 0.479±0.33 N/A 0.493±0.00 N/A 5.309±2.40 176.122±43.96 0.246±0.00 0.298±0.10 0.330±0.23 1.338±0.05 0.524±0.00 0.364±0.00 0.075±0.00 N/A
ENSMUSG00000094075 ENSMUST00000103547 0.298±0.15 N/A N/A N/A 4.540±1.44 46.879±17.26 0.158±0.01 0.745±0.48 0.117±0.05 2.034±1.06 0.390±0.00 0.676±0.28 N/A N/A
ENSMUSG00000094124 ENSMUST00000103543 0.159±0.00 0.471±0.04 N/A N/A 3.645±1.70 19.744±3.26 0.284±0.11 0.312±0.00 0.216±0.12 1.806±0.00 0.829±0.00 0.804±0.21 N/A N/A
ENSMUSG00000094689 ENSMUST00000103548 0.339±0.14 N/A N/A N/A 3.804±0.99 82.198±7.98 0.547±0.27 0.335±0.17 0.317±0.20 2.829±0.30 0.292±0.09 0.453±0.17 0.026±0.00 0.232±0.00
ENSMUSG00000094940 ENSMUST00000103551 0.898±0.27 N/A N/A N/A 0.941±0.22 17.627±9.87 0.296±0.01 0.368±0.15 0.040±0.00 0.454±0.07 N/A 0.448±0.23 N/A 7.768±7.56
ENSMUSG00000095127 ENSMUST00000103549 0.449±0.14 N/A 0.277±0.00 N/A 7.411±3.74 38.609±20.66 1.145±0.28 1.346±0.66 0.449±0.30 1.180±0.93 1.645±0.00 1.506±1.31 0.145±0.00 2.396±1.24
ENSMUSG00000096020 ENSMUST00000103544 0.323±0.01 N/A 0.085±0.00 N/A 1.985±1.29 20.051±6.69 0.283±0.00 0.194±0.07 0.391±0.23 0.840±0.59 0.554±0.00 0.490±0.26 0.356±0.00 N/A
ENSMUSG00000096150 ENSMUST00000103552 0.159±0.00 0.403±0.13 0.088±0.00 N/A 1.885±0.49 70.027±60.63 0.256±0.08 0.234±0.11 0.091±0.06 1.119±0.23 0.373±0.00 0.476±0.17 0.270±0.00 N/A
ENSMUSG00000096326 ENSMUST00000163670 1.874±0.11 N/A N/A N/A 3.156±0.97 56.674±49.84 1.289±0.14 0.899±0.45 0.228±0.09 3.056±1.23 0.472±0.00 1.506±0.87 0.289±0.00 N/A
ENSMUSG00000096452 ENSMUST00000170551 0.291±0.03 N/A N/A N/A 3.798±2.18 6.495±2.09 N/A 1.241±0.47 0.493±0.44 0.904±0.45 N/A 1.082±0.02 N/A N/A
ENSMUSG00000096466 ENSMUST00000103550 1.097±0.62 N/A N/A N/A 1.526±0.78 3.328±1.94 N/A 0.465±0.18 0.313±0.24 1.006±0.36 N/A 1.326±0.36 N/A 1.426±0.52

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