C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: human immunodeficiency virus type I enhancer binding protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000127124 HIVEP3 9606 - 1:41506365-42035925 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000247584 HIVEP3-201 41506368-41701001 protein_coding
  ENST00000372583 HIVEP3-002 41506365-41918498 protein_coding
  ENST00000372584 HIVEP3-001 41506365-41918707 protein_coding
  ENST00000460604 HIVEP3-003 41510230-41579900 processed_transcript
  ENST00000479350 HIVEP3-006 41847948-41869630 processed_transcript
  ENST00000489103 HIVEP3-004 41847191-42035925 processed_transcript
  ENST00000491442 HIVEP3-005 41847191-41918669 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000247584ENST00000372583ENST00000372584ENST00000460604ENST00000479350ENST00000489103ENST00000491442
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000247584 0.446±0.00 1.041±0.00 N/A 0.434±0.26 0.406±0.00 0.146±0.00 0.093±0.00 0.202±0.16 0.103±0.02 1.045±0.00 0.176±0.00 0.159±0.14 N/A 0.173±0.00
ENST00000372583 N/A N/A 0.312±0.00 N/A 0.356±0.00 0.114±0.00 0.238±0.00 N/A N/A N/A N/A 0.342±0.13 0.326±0.00 0.449±0.00
ENST00000372584 N/A N/A N/A N/A N/A N/A 0.066±0.02 N/A N/A N/A N/A N/A N/A 0.160±0.00
ENST00000460604 0.906±0.00 N/A N/A N/A N/A N/A N/A 0.422±0.00 N/A 4.077±0.00 N/A 0.243±0.14 0.572±0.25 0.773±0.12
ENST00000479350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.481±0.00 N/A N/A
ENST00000489103 0.645±0.00 1.881±0.00 N/A N/A 1.728±0.00 0.501±0.06 0.308±0.00 0.648±0.00 0.230±0.00 1.969±0.00 0.493±0.00 0.582±0.45 0.703±0.12 1.241±0.00
ENST00000491442 N/A N/A N/A 0.577±0.00 N/A N/A 0.378±0.20 N/A N/A N/A 0.248±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C0 CIL_0009C0_0001 VISTA 1:40944924-41547265
CIL_000876 CIL_000876_0001 VISTA 1:40945428-41547337
CIL_0004JF CIL_0004JF_0002 CGP 1:41478775-42035925

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0035914 IEA skeletal muscle cell differentiation
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037154 hivep3b human immunodeficiency virus type I enhancer binding protein 3b protein_coding Danio_rerio
ENSDARG00000075928 hivep3a human immunodeficiency virus type I enhancer binding protein 3a protein_coding Danio_rerio
ENSMUSG00000028634 Hivep3 human immunodeficiency virus type I enhancer binding protein 3 protein_coding Mus_musculus

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