C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: human immunodeficiency virus type I enhancer binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372583 HIVEP3-002 ENSG00000127124 9606 - 1:41506365-41918498 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartOvaryPlacentaTestisENST00000372583
Transcript ID Bladder Breast Colon Heart Ovary Placenta Testis
ENST00000372583 0.312±0.00 0.356±0.00 0.114±0.00 0.238±0.00 0.342±0.13 0.326±0.00 0.449±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C0 CIL_0009C0_0001 VISTA 1:40944924-41547265
CIL_000876 CIL_000876_0001 VISTA 1:40945428-41547337
CIL_0004JF CIL_0004JF_0002 CGP 1:41478775-42035925

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0035914 IEA skeletal muscle cell differentiation
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106307 Hivep3-001 protein_coding Mus_musculus 0 6457
ENSMUST00000166542 Hivep3-202 protein_coding Mus_musculus 0 5949

Loading