C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: growth factor, augmenter of liver regeneration
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000127554 GFER 9606 + 16:1984207-1987749 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000248114 GFER-001 1984213-1987749 protein_coding
  ENST00000561710 GFER-004 1984258-1985009 protein_coding
  ENST00000565658 GFER-005 1984332-1986618 retained_intron
  ENST00000567719 GFER-002 1984711-1986115 protein_coding
  ENST00000569451 GFER-003 1984207-1986112 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000248114ENST00000561710ENST00000565658ENST00000567719ENST00000569451
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000248114 2.268±0.00 5.049±0.00 0.365±0.00 5.347±0.00 3.707±0.00 2.472±2.10 0.794±0.70 2.410±0.00 1.476±0.90 2.994±0.00 2.410±0.00 2.796±0.86 3.827±0.58 3.997±0.88
ENST00000561710 N/A N/A N/A 2.622±0.00 N/A N/A 0.586±0.00 N/A 0.603±0.00 1.105±0.00 0.471±0.00 9.050±0.00 15.044±0.00 18.860±0.00
ENST00000565658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.645±0.00 N/A N/A
ENST00000567719 5.268±0.00 N/A N/A N/A N/A N/A 2.248±1.60 N/A 8.498±0.00 2.903±2.32 4.699±4.29 6.802±0.51 12.188±2.80 8.590±0.04
ENST00000569451 5.268±0.00 16.291±0.00 0.837±0.00 N/A 6.834±4.56 0.925±0.00 6.133±0.00 12.589±0.00 17.295±0.00 10.271±0.00 12.775±0.00 3.693±0.00 6.501±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029B CIL_00029B_0002 CGP 16:1984207-1994275

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006626 TAS protein targeting to mitochondrion
GO:0008083 IEA growth factor activity
GO:0015035 IDA protein disulfide oxidoreductase activity
GO:0016972 IEA thiol oxidase activity
GO:0044267 TAS cellular protein metabolic process
GO:0050660 IDA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070061 gfer growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000040888 Gfer growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration) protein_coding Mus_musculus

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