C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00029B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070061-ENSDARG00000014871 CGP 7955 3:40157181-40174983
GeneTranscriptPositionBiotype
ENSDARG00000006642 (drg2)
developmentally regulated GTP binding protein 2
ENSDART00000025285 (drg2-001) 40148601-40157649 protein_coding
ENSDART00000129664 (drg2-002) 40149023-40157625 protein_coding
ENSDART00000141963 (drg2-003) 40149076-40153469 processed_transcript
ENSDARG00000014871 (syngr3a)
synaptogyrin 3a
ENSDART00000011568 (syngr3a-001) 40164998-40174983 protein_coding
ENSDARG00000070061 (gfer)
growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae)
ENSDART00000102526 (gfer-001) 40158911-40163264 protein_coding
ENSDART00000131904 (gfer-002) 40158918-40160984 retained_intron
ENSDART00000147536 (gfer-003) 40157181-40163163 processed_transcript
CIL_00029B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000127554-ENSG00000127561 CGP 9606 16:1984207-1994275
GeneTranscriptPositionBiotype
ENSG00000127554 (GFER)
growth factor, augmenter of liver regeneration
ENST00000248114 (GFER-001) 1984213-1987749 protein_coding
ENST00000561710 (GFER-004) 1984258-1985009 protein_coding
ENST00000565658 (GFER-005) 1984332-1986618 retained_intron
ENST00000567719 (GFER-002) 1984711-1986115 protein_coding
ENST00000569451 (GFER-003) 1984207-1986112 protein_coding
ENSG00000127561 (SYNGR3)
synaptogyrin 3
ENST00000248121 (SYNGR3-001) 1989945-1994275 protein_coding
ENST00000562045 (SYNGR3-005) 1991124-1993374 protein_coding
ENST00000563869 (SYNGR3-003) 1989660-1993169 protein_coding
ENST00000564642 (SYNGR3-006) 1992463-1993298 retained_intron
ENST00000568896 (SYNGR3-004) 1990157-1992711 protein_coding
ENST00000618464 (SYNGR3-201) 1989999-1994267 protein_coding
ENSG00000261790 (AC005606.14)
ENST00000564438 (AC005606.14-001) 1984877-1986853 lincRNA
ENST00000565041 (AC005606.14-002) 1986266-1990357 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029B_0001ENSDARG00000006642ENSDART00000025285ENSDART00000129664ENSDART00000141963ENSDARG00000014871ENSDART00000011568ENSDARG00000070061ENSDART00000102526ENSDART00000131904ENSDART00000147536CIL_00029B_0002ENSG00000127554ENST00000248114ENST00000561710ENST00000565658ENST00000567719ENST00000569451ENSG00000127561ENST00000248121ENST00000562045ENST00000563869ENST00000564642ENST00000568896ENST00000618464ENSG00000261790ENST00000564438ENST00000565041
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029B_0001ENSDARG00000006642ENSDART00000025285ENSDART00000129664ENSDARG00000014871ENSDART00000011568ENSDARG00000070061ENSDART00000102526CIL_00029B_0002ENSG00000127554ENST00000248114ENST00000561710ENST00000565658ENST00000567719ENST00000569451ENSG00000127561ENST00000248121ENST00000562045ENST00000563869ENST00000564642ENST00000568896ENST00000618464ENSG00000261790ENST00000564438ENST00000565041
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006642 ENSDART00000025285 N/A N/A N/A 6.197±3.43 N/A N/A 13.082±10.35 3.964±3.61 4.144±0.00 N/A 12.955±0.00 N/A N/A N/A
ENSDART00000129664 N/A N/A N/A N/A N/A N/A N/A 8.188±0.00 1.604±0.00 N/A N/A N/A N/A N/A
ENSDART00000141963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000014871 ENSDART00000011568 N/A N/A N/A 18.342±3.89 N/A N/A 0.205±0.11 0.285±0.04 0.177±0.00 N/A 1.828±0.00 N/A N/A N/A
ENSDARG00000070061 ENSDART00000102526 N/A N/A N/A 7.113±2.99 N/A N/A 5.963±0.00 7.716±0.34 2.340±0.00 N/A 2.874±0.00 N/A N/A N/A
ENSDART00000131904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000127554 ENST00000248114 2.268±0.00 5.049±0.00 0.365±0.00 5.347±0.00 3.707±0.00 2.472±2.10 0.794±0.70 2.410±0.00 1.476±0.90 2.994±0.00 2.410±0.00 2.796±0.86 3.827±0.58 3.997±0.88
ENST00000561710 N/A N/A N/A 2.622±0.00 N/A N/A 0.586±0.00 N/A 0.603±0.00 1.105±0.00 0.471±0.00 9.050±0.00 15.044±0.00 18.860±0.00
ENST00000565658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.645±0.00 N/A N/A
ENST00000567719 5.268±0.00 N/A N/A N/A N/A N/A 2.248±1.60 N/A 8.498±0.00 2.903±2.32 4.699±4.29 6.802±0.51 12.188±2.80 8.590±0.04
ENST00000569451 5.268±0.00 16.291±0.00 0.837±0.00 N/A 6.834±4.56 0.925±0.00 6.133±0.00 12.589±0.00 17.295±0.00 10.271±0.00 12.775±0.00 3.693±0.00 6.501±0.00 N/A
ENSG00000127561 ENST00000248121 N/A N/A N/A 11.470±0.00 N/A 1.426±0.00 N/A 0.336±0.00 N/A N/A N/A 0.213±0.06 1.124±0.78 0.648±0.00
ENST00000562045 N/A N/A N/A N/A 0.074±0.05 0.164±0.00 N/A N/A 0.036±0.02 0.216±0.00 N/A 0.052±0.00 N/A N/A
ENST00000563869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00 N/A N/A
ENST00000564642 0.191±0.00 N/A 0.124±0.00 N/A N/A N/A 0.462±0.00 N/A N/A N/A 0.249±0.00 N/A N/A N/A
ENST00000568896 N/A N/A N/A N/A N/A 0.987±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618464 0.135±0.00 N/A N/A 8.659±4.47 0.042±0.00 1.181±0.00 N/A 0.779±0.47 0.034±0.00 0.766±0.00 0.034±0.00 0.440±0.00 2.805±2.24 N/A
ENSG00000261790 ENST00000564438 2.090±0.00 N/A N/A N/A N/A N/A 2.554±0.00 3.686±0.00 3.297±0.00 1.629±1.10 4.299±0.00 2.060±0.00 N/A N/A
ENST00000565041 N/A N/A 0.543±0.00 N/A N/A N/A N/A 0.250±0.00 N/A N/A N/A N/A 4.371±0.00 N/A

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