C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: huntingtin interacting protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000127946 HIP1 9606 - 7:75533300-75738962 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000336926 HIP1-001 75533300-75738947 protein_coding
  ENST00000404944 HIP1-005 75558222-75563385 retained_intron
  ENST00000420909 HIP1-004 75582092-75611843 protein_coding
  ENST00000434438 HIP1-002 75534088-75738941 protein_coding
  ENST00000479835 HIP1-003 75733460-75738962 processed_transcript
  ENST00000485723 HIP1-007 75654413-75738935 processed_transcript
  ENST00000616821 HIP1-201 75538083-75611702 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336926ENST00000404944ENST00000434438ENST00000616821
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336926 7.135±0.00 4.145±0.00 1.465±0.00 1.695±1.22 1.865±1.57 2.288±0.00 3.039±0.00 3.553±0.00 0.554±0.02 7.244±0.00 0.558±0.19 2.214±1.51 4.588±2.28 N/A
ENST00000404944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 46.404±0.00
ENST00000434438 N/A N/A N/A 0.883±0.00 0.918±0.00 N/A 0.209±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000616821 N/A N/A 2.247±0.00 1.014±0.00 2.144±0.00 0.701±0.00 1.105±0.00 N/A 1.666±0.00 3.356±0.00 N/A 1.749±0.58 3.689±0.00 20.726±14.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NO CIL_0006NO_0001 CGP 7:75533300-75789896

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005543 IEA phospholipid binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005856 TAS cytoskeleton
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006897 IEA endocytosis
GO:0006915 IDA apoptotic process
GO:0006919 IDA activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0016020 IEA membrane
GO:0030136 IDA clathrin-coated vesicle
GO:0030154 IEA cell differentiation
GO:0030276 IDA clathrin binding
GO:0035091 IDA phosphatidylinositol binding
GO:0042981 IDA regulation of apoptotic process
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0048260 IMP positive regulation of receptor-mediated endocytosis
GO:0048268 IDA clathrin coat assembly
GO:0097190 IDA apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062972 hip1 huntingtin interacting protein 1 protein_coding Danio_rerio
ENSMUSG00000039959 Hip1 huntingtin interacting protein 1 protein_coding Mus_musculus

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